| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3140 |
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| Symbol | |
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| ID | 5085299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | + |
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| Start bp | 230 |
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| End bp | 1681 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640484712 |
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| Product | hypothetical protein |
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| Protein accession | YP_001169329 |
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| Protein GI | 146279171 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.673481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.234219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTGC CCACCCCCCG ATCCTCGCTG AAGGCCGTCC TGATTGCCAG CACCCTCCTT
GCCGGAGGTG CCGTCGGCAC CGCGCTGCCG GTGGCGCCTG CCCACGCCGA GGTGCCGATG
CAGGGCTACG CCGATCTCGT GGCCCGTGTC TCGCCGGCCG TCGTCTTCAT CGAGGTGACC
GCCAAGTCGC AGGAGCCGGC CCCGAGGGCG GCATCCCCGC TCGAGGAGTT CCTTCGCCGC
TTCGGCGAGA TCGACCCGCA ATTCCGCATG CCCGCCCCGC CGGAGCGGGA CCGCGTCATG
CACGGGCTCG GGTCGGGGTT CCTGATCTCG CAGGACGGCG TGATCGTGAC CAACAACCAC
GTTGTCGAGA ATGCCACCGA CATGACCGTC AAGCTCGAGG ACGGGCGCGA GTTCAAGGCC
GAGATGGTGG GCGCCGATCC CATGACCGAC ATCGCCGTGA TCCGGCTGCG GGATGCGAGT
GATCTGCCCT TCGTCGAGTT CGGGGACAGC GACCGGCTGC GCGTGGGCGA TGCGGTCGTG
GCGGTCGGCA ATCCGTTCGG CCTTGGCGGG ACGGTCACGT CGGGCATCGT CTCGGCCATG
GGGCGCAACA TCAACTCCGG CCCCTATGAC GACTACATCC AGACCGACGC CGCCATCAAC
CGGGGCAACT CGGGCGGACC GCTCTTCGAC ACGAGCGGCA CGGTGGTGGG CATGAACACG
GCGATCTTCT CGCCCACGGG AGGCTCGGTT GGCATCGGCT TCTCGATCCC GGCCAACACG
GTGCGGGATG TCGTGGCGCA ACTGCAGGAA ACGGGTTCGG TCTCGCGCGG ATGGCTGGGC
GTGACGATCC AGCCCCTGAC GCCCGAGATC GCGCAGGCGC TGGGTCTCGA GGGCAGCCGG
GGGGCGCTCG TGGCCGAGGT GCAGCCGGAC AGCCCGGCCG AGGCGGGAGG CGTCGAGAGC
GGCGATGTCA TCACCGCCGT CAACGGGCAG GAGATCGGCG AGCGGTCCAG CCTGCCCCGG
CTGATCGCGG CCATCCCGAA CGGCGAGGAG GCCCGGCTCA CCGTTCAGCG CGACGGGCGC
GAGCGTGAGA TGACGGTCAC GATCGGCGAG CTGTCGGCCG ACCGGCTGGA GCCCGCCGCG
GCCGCCGCGC CGGAGGGGCT GGGCGCGCCG CTCGGGCTCG AGGTTCAGCC GCTGGAGCCT
GCGCTGGCCC GGCAACTCGG ACTGCCCGAA GATGCCTCGG GCGTGGTGGT GACGGCGGTC
GATCCGGCTG GCCCGAACGC CGACCGGCTG GCGCCCGGAG ACGTGATCGA GGAGGCCGGT
GGGCGTGCGA TCGCGACGCC GCGGGATCTT GCCTCGGCCG TGGCGGAGGC GCGCGGCCGC
GGGGTCCTGT TGCTGAAGGT GCTGCGGCAG GGCAATCCCG TCTATGTGGG TGCCGAGGTC
GCCGCGTCCT GA
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| Protein sequence | MSLPTPRSSL KAVLIASTLL AGGAVGTALP VAPAHAEVPM QGYADLVARV SPAVVFIEVT
AKSQEPAPRA ASPLEEFLRR FGEIDPQFRM PAPPERDRVM HGLGSGFLIS QDGVIVTNNH
VVENATDMTV KLEDGREFKA EMVGADPMTD IAVIRLRDAS DLPFVEFGDS DRLRVGDAVV
AVGNPFGLGG TVTSGIVSAM GRNINSGPYD DYIQTDAAIN RGNSGGPLFD TSGTVVGMNT
AIFSPTGGSV GIGFSIPANT VRDVVAQLQE TGSVSRGWLG VTIQPLTPEI AQALGLEGSR
GALVAEVQPD SPAEAGGVES GDVITAVNGQ EIGERSSLPR LIAAIPNGEE ARLTVQRDGR
EREMTVTIGE LSADRLEPAA AAAPEGLGAP LGLEVQPLEP ALARQLGLPE DASGVVVTAV
DPAGPNADRL APGDVIEEAG GRAIATPRDL ASAVAEARGR GVLLLKVLRQ GNPVYVGAEV
AAS
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