| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3139 |
|---|
| Symbol | |
|---|
| ID | 5083091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 3216366 |
|---|
| End bp | 3217574 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640484711 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001169328 |
|---|
| Protein GI | 146279169 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2081] Predicted flavoproteins |
|---|
| TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000634596 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000000576575 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCTC TGGTGATCGG CGGCGGGCCG GCGGGCCTCA TGGCGGCCGA AGAACTTGCA
CGGGCCGGGC GCCGGACCGT GATCTGCGAG GCGAAACCCA GCGTCGCGCG CAAGCTGCTG
ATGGCCGGCA AATCGGGCCT CAACATCACC AAGGACGAGC CGGCCGCATC CTTCCTCGCC
CGGTATGAGG AGGCCGCGGA CTGGCTGGCG CCCATGCTCG CCGATTTCGG ACCGGCCGAG
GTGCAGGACT GGTGCCGCGC GCTCGGGCAG CCGGTCTTCA CCGGCTCGTC CGGGCGGGTG
TTCCCGGAGG CCATGAAGGC GTCCCCGCTG CTGCGCGCGT GGCTGGCGCG GCTGGCCTCG
CTCGGCGTCG AGATCCGCAC CCGCTGGCGC TGGGAAGGGT TTGGCGCGGG TCTTTGCTTC
CGCACGCCCG ACGGCATGGT CGACCTCGCG CCGCGCGTGA TTGTGCTCGC CCTCGGCGGG
GCGAGTTGGT CACGGCTGGG CTCGGACGGC GCATGGGCCC CGTGGCTTGC AGCGCGGGGC
GTCGGAATCG CGCCCTTCCA CCCCGCCAAC ATGGGTTTCC GCGTGACCTG GTCTGCGCAC
ATGGCCCGGC ATTTCGGTTC GCCCGTCAAG GGTGTGGTCC TGCTGGCGGG GGATCGTCGG
GAGAGGGGCG AGTTCGTGAT CTCGGCCCGC GGCCTCGAGG GCGGCGGCAT CTACGCCATC
GCGCGCCTGC TGCGCGAAGG CGCTCCGCTT GCGCTCGATC TGTTGCCGGA TCTGACAGTT
GATGATGTGC GCGCCCGGCT GGCCCGCGGC CGGGCCGGAG AGAGCCTCGC CAACCGCCTG
CGCAAGCTGG GCCTTGCGCC CGCAGCCGTG GCGCTGGTGC AGGAGTTCGC GCGTCCCCTC
CCCCCGATCG AGGTTCTGGC GGCGCGGCTC AAGGAGCTGC CGGTGCCGCT GGACGGGCCA
CGTCCGCTCG ACGAGGCGAT CTCGACCGCC GGGGGCATCA CCCGCGAAAG CCTGACCGAC
AGCCTCGAAC TGCGCGCGCT TCCGGGCGTC TTTGCCTGCG GGGAAATGCT GGACTGGGAG
GCGCCGACCG GGGGCTATCT CCTCACCGCC TGCCTCGCGA CCGGACGCCA TGCCGGCCGC
GCGGCAGCCT TTTTCAACGG GCCCGGATTC AGAGCCCCGG AGCCACCGCC GTCAGGGTCC
GCCGGCTGA
|
|---|
| Protein sequence | MDALVIGGGP AGLMAAEELA RAGRRTVICE AKPSVARKLL MAGKSGLNIT KDEPAASFLA
RYEEAADWLA PMLADFGPAE VQDWCRALGQ PVFTGSSGRV FPEAMKASPL LRAWLARLAS
LGVEIRTRWR WEGFGAGLCF RTPDGMVDLA PRVIVLALGG ASWSRLGSDG AWAPWLAARG
VGIAPFHPAN MGFRVTWSAH MARHFGSPVK GVVLLAGDRR ERGEFVISAR GLEGGGIYAI
ARLLREGAPL ALDLLPDLTV DDVRARLARG RAGESLANRL RKLGLAPAAV ALVQEFARPL
PPIEVLAARL KELPVPLDGP RPLDEAISTA GGITRESLTD SLELRALPGV FACGEMLDWE
APTGGYLLTA CLATGRHAGR AAAFFNGPGF RAPEPPPSGS AG
|
|---|
| |