Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3126 |
Symbol | |
ID | 5083324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 3202415 |
End bp | 3203038 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640484698 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001169315 |
Protein GI | 146279156 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.333802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00150199 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCAGCCG ACACGATCCC GCTTCGCAAG GGCCGCAAGA TGCCACAGGT GCTCGAGGGC GCCCGGAAGG TGTTCCTGCG CGACGGGTTC GAGGGGGCGA GCGTCGATGA CATCGCGCGC GAGGCGGGCG TGTCCAAGGC GACGCTCTAC AGCTACTTTC CCGACAAGCG GCTTCTTTTT CTGGAGGTCG CCAAGGCCGA GTGCCTGCGG CAGGCCGAAG AGGCCGTGGC GCTGATCACC TCCGACCTCG GCCCGCGCGA GGTTCTGACG ATGGCGGCCA CTCGCATCGT CGATTTCGTG CTGTCCGACT TCGGGATTCG CACCTACCGG ATCTGCGTGG CCGAGGCCGA CAGGTTCCTC GAACTCGGGC ACGAGTTCTA CGAGAGCGGG CCGGCCCTCG TCCGCCAGAG GATCGTGGAT TACCTGCGGC AGGCCGTGGC GCGGCATGAG CTGATCATCG AAGATCTCGA GCTTGCCGCC GACCAGTTCG CCGAGCTGTG CAAGGCCGAC CTCTTCAACC GCATCGTCTT CGGCGTGGGC GCGGCGGTGA GTGCCGGGGA GCGGCGCCGG GTGGTGGCCG GAGCGGTCGA GATGTTCCTC GCCCGCTACG CGCCGAAGGG CTGA
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Protein sequence | MPADTIPLRK GRKMPQVLEG ARKVFLRDGF EGASVDDIAR EAGVSKATLY SYFPDKRLLF LEVAKAECLR QAEEAVALIT SDLGPREVLT MAATRIVDFV LSDFGIRTYR ICVAEADRFL ELGHEFYESG PALVRQRIVD YLRQAVARHE LIIEDLELAA DQFAELCKAD LFNRIVFGVG AAVSAGERRR VVAGAVEMFL ARYAPKG
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