Gene Rsph17025_3122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3122 
Symbol 
ID5083320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp3199542 
End bp3200027 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content70% 
IMG OID640484694 
Producthypothetical protein 
Protein accessionYP_001169311 
Protein GI146279152 
COG category[S] Function unknown 
COG ID[COG1671] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00127943 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTGAGC TCTACATCGA CGCCGATGCC TGCCCGGTGA AGGCCGAGGC AGAGCGTGTG 
GCCGTGCGGC ACGGGGCGCG GATGTATCTC GTGTCGAACG GTGGCATCCG GCCTCCGGCC
CATCCGCTGG TCGAGAGCGT CTTCGTGCCC GAGGGGCCGG ATGCCGCCGA CAAGTGGATC
GCCGACCGTG CGGGCACGGG CGATGTCGTG GTGACCTCGG ACATCCCGCT CGCCGCGAAG
GCCGTGGCGG CGGGGGCCCT GGTGGTCAAG CCGAACGGCG AGACGCTGAC CACGGCCAAT
ATCGGCAATG CGCTGGCCAC GCGCGACCTG ATGGCCGATC TGCGCTCGGC CGACCCGTTC
CGGCAGGGCG GCGGTCGGCC CTTTTCCAGG GCCGACCGGT CGCGCTTTCT CGACGCACTG
GAACGTGCGA TGCGCAAGGC CGCGGAAGCG GCGCGCGACG CAGGACAGGA TGAGGCAGGA
ACATGA
 
Protein sequence
MAELYIDADA CPVKAEAERV AVRHGARMYL VSNGGIRPPA HPLVESVFVP EGPDAADKWI 
ADRAGTGDVV VTSDIPLAAK AVAAGALVVK PNGETLTTAN IGNALATRDL MADLRSADPF
RQGGGRPFSR ADRSRFLDAL ERAMRKAAEA ARDAGQDEAG T