Gene Rsph17025_3116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3116 
Symbol 
ID5083314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp3194389 
End bp3194877 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content69% 
IMG OID640484688 
Producthypothetical protein 
Protein accessionYP_001169305 
Protein GI146279146 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00283902 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACACCGT TCAAGACGCT TCTCGCGGCC GCGGCCGCCG CCGTCACCTT CGCCCTGCCG 
GCCTTCGCCG ACAGCAACAT TGCCGTGCGG GACGCCTATG CCCGCGTTTC AAGCCCCGCC
GCGAAATCCG GCGGCATCTT CATGGTGATC GAGAATCACG GCAGCACCGC CGACCGGCTG
GTGTCGGCCG CGTCCGAGGC CGCGGCCAAG GTCGAGCTGC ACACCCATCT CGCGGGTGAG
GACGGGATTA TGCGGATGGT CGAGGTTCCC GAAGGCTTCG AGGTTCCCGC CCAGGGCAGC
CATGCGCTCG CCCGCGGCGG CGACCATGTC ATGCTGATGG GCCTCACGAG GCCGCTGAAG
GAGGGCGACG AGGTGGCTCT GACGCTCACG TTCGAAAGCG GCGCGCGCGT GGATCTCGCC
GTGCCCGTGG ACCTCACCCG CGAGGATGCG GGCGCCCACC AGATGCAGGG CATGGATCAC
GCGCACTGA
 
Protein sequence
MTPFKTLLAA AAAAVTFALP AFADSNIAVR DAYARVSSPA AKSGGIFMVI ENHGSTADRL 
VSAASEAAAK VELHTHLAGE DGIMRMVEVP EGFEVPAQGS HALARGGDHV MLMGLTRPLK
EGDEVALTLT FESGARVDLA VPVDLTREDA GAHQMQGMDH AH