Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3116 |
Symbol | |
ID | 5083314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 3194389 |
End bp | 3194877 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640484688 |
Product | hypothetical protein |
Protein accession | YP_001169305 |
Protein GI | 146279146 |
COG category | [S] Function unknown |
COG ID | [COG2847] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00283902 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACACCGT TCAAGACGCT TCTCGCGGCC GCGGCCGCCG CCGTCACCTT CGCCCTGCCG GCCTTCGCCG ACAGCAACAT TGCCGTGCGG GACGCCTATG CCCGCGTTTC AAGCCCCGCC GCGAAATCCG GCGGCATCTT CATGGTGATC GAGAATCACG GCAGCACCGC CGACCGGCTG GTGTCGGCCG CGTCCGAGGC CGCGGCCAAG GTCGAGCTGC ACACCCATCT CGCGGGTGAG GACGGGATTA TGCGGATGGT CGAGGTTCCC GAAGGCTTCG AGGTTCCCGC CCAGGGCAGC CATGCGCTCG CCCGCGGCGG CGACCATGTC ATGCTGATGG GCCTCACGAG GCCGCTGAAG GAGGGCGACG AGGTGGCTCT GACGCTCACG TTCGAAAGCG GCGCGCGCGT GGATCTCGCC GTGCCCGTGG ACCTCACCCG CGAGGATGCG GGCGCCCACC AGATGCAGGG CATGGATCAC GCGCACTGA
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Protein sequence | MTPFKTLLAA AAAAVTFALP AFADSNIAVR DAYARVSSPA AKSGGIFMVI ENHGSTADRL VSAASEAAAK VELHTHLAGE DGIMRMVEVP EGFEVPAQGS HALARGGDHV MLMGLTRPLK EGDEVALTLT FESGARVDLA VPVDLTREDA GAHQMQGMDH AH
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