Gene Rsph17025_3094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3094 
Symbol 
ID5083181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp3171118 
End bp3171804 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content68% 
IMG OID640484666 
ProductLexA repressor 
Protein accessionYP_001169283 
Protein GI146279124 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.938529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.561112 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGACAC GCAAGCAGAT GGAACTGCTG GATTTCATCA AGACACGGAT GGACCGCGAC 
GGCGTGCCGC CCTCGTTCGA CGAGATGAAG GATGCGCTCG ACCTGCGGTC GAAGTCCGGC
ATCCATCGGC TGATCACCGC GCTGGAAGAG CGTGGCTTCA TCCGCCGCCT TGCCCACCGC
GCCCGCGCGA TCGAGATCGT GAAGCTGCCC GAGGCGATGG AGCGGGCGGG CTTTGCCCCC
CGTGTGATCG AGGGCGACCG GACGGAGCCT CCTCGGGGCG CGCGCCCGGT GGAAACGGCG
AACGCGCTCG ATCTGCCCCT GATGGGCCGG ATCGCGGCGG GCCTGCCGAT CGAGGCCATC
ACGGACGGGG CGCAGTCGGT CACGGTGCCG AGCATGATGC TGTCGGGCCG CGGGCAGCAC
TACGCGCTGG AAGTCCGCGG CGATTCGATG ATCGAGGCCG GGATCAACGA CGGCGACATC
GTCGTGATCC GCGAGCAGCA GACGGCGGAC AATGGCGACA TCGTGGTGGC GCTGGTCGCG
GATCATGAGG CGACGCTGAA ACGCTTCCGT CGCCGCGGCG GCATGATCGC GCTCGAACCC
GCCAACGCCT CCTACGAGAC GCAGGTCTAT CCCGACCACA TGGTCAAGGT TCAGGGCAGG
CTCGTGGGGC TGATCCGCAG CTACTGA
 
Protein sequence
MLTRKQMELL DFIKTRMDRD GVPPSFDEMK DALDLRSKSG IHRLITALEE RGFIRRLAHR 
ARAIEIVKLP EAMERAGFAP RVIEGDRTEP PRGARPVETA NALDLPLMGR IAAGLPIEAI
TDGAQSVTVP SMMLSGRGQH YALEVRGDSM IEAGINDGDI VVIREQQTAD NGDIVVALVA
DHEATLKRFR RRGGMIALEP ANASYETQVY PDHMVKVQGR LVGLIRSY