Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3094 |
Symbol | |
ID | 5083181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 3171118 |
End bp | 3171804 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640484666 |
Product | LexA repressor |
Protein accession | YP_001169283 |
Protein GI | 146279124 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.938529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.561112 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGACAC GCAAGCAGAT GGAACTGCTG GATTTCATCA AGACACGGAT GGACCGCGAC GGCGTGCCGC CCTCGTTCGA CGAGATGAAG GATGCGCTCG ACCTGCGGTC GAAGTCCGGC ATCCATCGGC TGATCACCGC GCTGGAAGAG CGTGGCTTCA TCCGCCGCCT TGCCCACCGC GCCCGCGCGA TCGAGATCGT GAAGCTGCCC GAGGCGATGG AGCGGGCGGG CTTTGCCCCC CGTGTGATCG AGGGCGACCG GACGGAGCCT CCTCGGGGCG CGCGCCCGGT GGAAACGGCG AACGCGCTCG ATCTGCCCCT GATGGGCCGG ATCGCGGCGG GCCTGCCGAT CGAGGCCATC ACGGACGGGG CGCAGTCGGT CACGGTGCCG AGCATGATGC TGTCGGGCCG CGGGCAGCAC TACGCGCTGG AAGTCCGCGG CGATTCGATG ATCGAGGCCG GGATCAACGA CGGCGACATC GTCGTGATCC GCGAGCAGCA GACGGCGGAC AATGGCGACA TCGTGGTGGC GCTGGTCGCG GATCATGAGG CGACGCTGAA ACGCTTCCGT CGCCGCGGCG GCATGATCGC GCTCGAACCC GCCAACGCCT CCTACGAGAC GCAGGTCTAT CCCGACCACA TGGTCAAGGT TCAGGGCAGG CTCGTGGGGC TGATCCGCAG CTACTGA
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Protein sequence | MLTRKQMELL DFIKTRMDRD GVPPSFDEMK DALDLRSKSG IHRLITALEE RGFIRRLAHR ARAIEIVKLP EAMERAGFAP RVIEGDRTEP PRGARPVETA NALDLPLMGR IAAGLPIEAI TDGAQSVTVP SMMLSGRGQH YALEVRGDSM IEAGINDGDI VVIREQQTAD NGDIVVALVA DHEATLKRFR RRGGMIALEP ANASYETQVY PDHMVKVQGR LVGLIRSY
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