Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3073 |
Symbol | |
ID | 5083160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 3143641 |
End bp | 3145500 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640484645 |
Product | cobaltochelatase |
Protein accession | YP_001169262 |
Protein GI | 146279103 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) |
TIGRFAM ID | [TIGR01651] cobaltochelatase, CobT subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGC CCACCGACAA TCCCGCCGAT CCGTTCAAGA AGGCCCTCGC CGAGGCGACC AAGACGCTCG CCGACGACCC GGACATGACG GTGACCTTCT CGGTCGATCC CGCGGGGATG AACCGCGAGG GGATGCGCCT GCCGCAGGTC AGCCGCCGGA TGACGCGCGA CGAGGTGATG CTCGCCCGCG GCACGGCCGA CGCCTTCGCG CTGCGCCGCC GGTATCATGA TGATGCAATC TCGGCCCGCT ACCTGCCGCA GGGCCAGATG GCGCGCGAGA TCTACGAGGC GATGGAGGCG GCCCGTTGCG AGGCGGTGGG CGCCCGCACC ATGCCGGGCA CCGCGGGCAA CATCGACGCC CGGATCGGCC ACGAGGCCGA GCGCAAGGGC TATGGCCAGA TCACGCAGGC TGCGGATGCG CCGCTCGCCA CGGCGGCGGG CTATCTCGTG CGCCATCTGG CGACGGGGCG GACCCTGCCC GGCGGCGCCG ACAATGTGAT GGAGCTGTGG CGCGGCTTCA TCGAGCAGCA GGCGGGCGGG ACGCTCCAGA ACCTCGACGA GGTGCTGGCC GATCAGGCGG CCTTTGCGCG ACTGGCCCGC AAGGTGATCT CCGATCTGGG CTACGGCGAC CAACTCGGCG ACGATCCGGA CACGGACGAG CAGGACGACG CGGGCGAGGA CGCGGAGACC GACGAGGACG AGTCGCAGAG CCAGGGCGAG GACGACTCCG ACGAGTCGCA GGAAGCGCAG CCCGAGCGCA GCCAGGAGGA ACAGCAGGAT CCCAGTCAGG CGCAGGTCTC GATGGAGGAC CAGCCCGACG CCGATCAGGG CGAAGAGGTG GAGATGCCCG ACGGCGAGGC GCCGCTCGAG CCGCCTCCCC CTGCCCCGCA CTCCGAGGCC GACCCCGCCT ATACGGTCTT CGCCACCGAC TTCGACGAGG AGATCCGCGC CGAGGATCTG GCCGAGCCCG CCGAACTCGA GCGGCTGCGC GCCTATCTCG ACCAGCAGCT CGAACCGCTG AAGGGCGCGG TCAGCCGCCT TGCCAACAAG CTCCAGCGCC GGTTGCAGGC GCAGCAGAAC CGCAGCTGGG AGTTCGACCG CGAGGAGGGC ATCCTCGACG CCGGCCGCCT TGCGCGGGTG GTGGCCAACC CCACCACGCC GCTCTCCTTC AAGGTCGAGA AGGACACCGA GTTCCGCGAC ACCTGCGTGA CGCTGCTGCT GGACAACTCG GGCTCGATGC GCGGCCGGCC GATCTCGATC GCCGCGATCT GCGCCGATGT GCTGGCGCGG ACGCTGGAAC GCTGTCAGGT CAAGGTCGAG ATCCTCGGCT TCACCACCCG CGCCTGGAAG GGCGGGCAGA GCCGCGAGAA GTGGCTCGCC GCCGCAAGGC CGCAGCAGCC CGGTCGGCTC AACGATCTGC GCCACATCAT CTACAAGGGC GCCGACGCGC CCTGGCGGCG CGCGCGGGAA AATCTCGGAT TGATGATGAA GGAAGGGCTC CTCAAGGAGA ACATCGACGG CGAGGCGCTG GAATGGGCGC ACCGCCGCCT GAGCCACCGC CCCGAGGCGC GCAAGATCCT GATGGTGATC TCGGACGGGG CGCCGGTGGA TGATTCCACC CTGTCGGTGA ACCCGGCGAG CTATCTTGAA AAACACCTCC GCGACGTGAT CTCGATGGTC GAGCGCAAGC GGCAGGTAGA GCTTATCGCC ATCGGCATCG GCCATGACGT GACGCGCTAC TATGCCCACG CCGTCACGAT CACGGATGTG GAGCAACTGG CGGGCGCCAT GACCGAGCAG CTCGCCTCCC TTTTCGACGC CGATCCGAAG AAGCGCATCG GCAAACGGCG GGTGGCCTGA
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Protein sequence | MSKPTDNPAD PFKKALAEAT KTLADDPDMT VTFSVDPAGM NREGMRLPQV SRRMTRDEVM LARGTADAFA LRRRYHDDAI SARYLPQGQM AREIYEAMEA ARCEAVGART MPGTAGNIDA RIGHEAERKG YGQITQAADA PLATAAGYLV RHLATGRTLP GGADNVMELW RGFIEQQAGG TLQNLDEVLA DQAAFARLAR KVISDLGYGD QLGDDPDTDE QDDAGEDAET DEDESQSQGE DDSDESQEAQ PERSQEEQQD PSQAQVSMED QPDADQGEEV EMPDGEAPLE PPPPAPHSEA DPAYTVFATD FDEEIRAEDL AEPAELERLR AYLDQQLEPL KGAVSRLANK LQRRLQAQQN RSWEFDREEG ILDAGRLARV VANPTTPLSF KVEKDTEFRD TCVTLLLDNS GSMRGRPISI AAICADVLAR TLERCQVKVE ILGFTTRAWK GGQSREKWLA AARPQQPGRL NDLRHIIYKG ADAPWRRARE NLGLMMKEGL LKENIDGEAL EWAHRRLSHR PEARKILMVI SDGAPVDDST LSVNPASYLE KHLRDVISMV ERKRQVELIA IGIGHDVTRY YAHAVTITDV EQLAGAMTEQ LASLFDADPK KRIGKRRVA
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