Gene Rsph17025_3067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3067 
Symbol 
ID5083154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp3138525 
End bp3139115 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content71% 
IMG OID640484639 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_001169256 
Protein GI146279097 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.175313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.45014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACGTG TCGCCGTCAT GATCTCGGGC GGAGGCTCGA ACATGCTGGC TCTCGTGCGC 
AGCATGGTGG GGGATCATCC GGCGCGGCCG GTTCTGGTGG CCTCGAACGA CCCCGAGGCG
GGGGGGCTTG CCCGGGCCGC GGCACTCGGC GTGCCGGTTG CGGCGGTGGA TCACCGGCCG
TTCCGGGGCG ACCGCGCCGC CTTCGAGGCG GCCCTGCTCG AGCCGATCCT TGCGGCCGAC
GCGGACATCC TGTGCCTTGC GGGCTTCATG CGCGTGCTGA CGGCCGATTT CGTCGCGCGT
TTCGAGGGGC GGATGCTGAA CATCCATCCC TCGTTGCTGC CCAAGTATCA GGGGTTGCAC
ACGCACCGGC GGGCGCTCGA GGCCGGCGAC ACCGAGGCCG GCTGCACCGT GCATGAGGTG
ACGGCCGCGC TGGACGACGG GCCGATCCTC GGACAGGCGC GGGTGCCGGT GCTGGCCGGG
GATACGCCCG ACAGCCTGGC CGCCCGGGTG CTTGCGCGCG AACATGTGCT TTATCCGGCC
GTTCTGCGCC GTTTTGCATC GGGCGACCGC ACGCCGATCT GGCTGGCCTG A
 
Protein sequence
MKRVAVMISG GGSNMLALVR SMVGDHPARP VLVASNDPEA GGLARAAALG VPVAAVDHRP 
FRGDRAAFEA ALLEPILAAD ADILCLAGFM RVLTADFVAR FEGRMLNIHP SLLPKYQGLH
THRRALEAGD TEAGCTVHEV TAALDDGPIL GQARVPVLAG DTPDSLAARV LAREHVLYPA
VLRRFASGDR TPIWLA