Gene Rsph17025_3052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3052 
Symbol 
ID5084391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp3123806 
End bp3124291 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content70% 
IMG OID640484623 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_001169241 
Protein GI146279082 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.754193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTGG ACGTTGGGAT CATCATGGGC AGCCAGTCCG ACTGGGCCAC AATGAAGGAG 
GCCGCCGCGA TCCTGGACGA GCTTGGCATC GCCTACGAGG CGAAGATCGT CTCGGCGCAC
CGCACGCCCG ATCGGCTATG GACCTACGGC AAGACCGCCG TCGAGCGCGG CCTCAAGGTC
ATCATCGCGG GGGCGGGCGG CGCGGCCCAT CTGCCCGGCA TGATGGCCTC GAAGACGCGG
GTGCCGGTGA TCGGCGTGCC TGTCCAGACG AGGGCGCTCT CGGGCGTGGA CAGCCTCTAT
TCCATCGTCC AGATGCCCAA GGGCTTTCCG GTGGCCACCA TGGCCATCGG CGCGGCGGGC
GCGGCCAACG CGGGCCTGAT GGCGGCGGGC ATCCTCGCGA TCTCCGATCC GGCGCTCGGC
CAGCGGCTCG ACGACTGGCG CGCCGCCCTC TCCGCCTCCA TCCCCGAGGA GCCTTCCGAT
GACTGA
 
Protein sequence
MAVDVGIIMG SQSDWATMKE AAAILDELGI AYEAKIVSAH RTPDRLWTYG KTAVERGLKV 
IIAGAGGAAH LPGMMASKTR VPVIGVPVQT RALSGVDSLY SIVQMPKGFP VATMAIGAAG
AANAGLMAAG ILAISDPALG QRLDDWRAAL SASIPEEPSD D