Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3052 |
Symbol | |
ID | 5084391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 3123806 |
End bp | 3124291 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640484623 |
Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
Protein accession | YP_001169241 |
Protein GI | 146279082 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.754193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTGG ACGTTGGGAT CATCATGGGC AGCCAGTCCG ACTGGGCCAC AATGAAGGAG GCCGCCGCGA TCCTGGACGA GCTTGGCATC GCCTACGAGG CGAAGATCGT CTCGGCGCAC CGCACGCCCG ATCGGCTATG GACCTACGGC AAGACCGCCG TCGAGCGCGG CCTCAAGGTC ATCATCGCGG GGGCGGGCGG CGCGGCCCAT CTGCCCGGCA TGATGGCCTC GAAGACGCGG GTGCCGGTGA TCGGCGTGCC TGTCCAGACG AGGGCGCTCT CGGGCGTGGA CAGCCTCTAT TCCATCGTCC AGATGCCCAA GGGCTTTCCG GTGGCCACCA TGGCCATCGG CGCGGCGGGC GCGGCCAACG CGGGCCTGAT GGCGGCGGGC ATCCTCGCGA TCTCCGATCC GGCGCTCGGC CAGCGGCTCG ACGACTGGCG CGCCGCCCTC TCCGCCTCCA TCCCCGAGGA GCCTTCCGAT GACTGA
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Protein sequence | MAVDVGIIMG SQSDWATMKE AAAILDELGI AYEAKIVSAH RTPDRLWTYG KTAVERGLKV IIAGAGGAAH LPGMMASKTR VPVIGVPVQT RALSGVDSLY SIVQMPKGFP VATMAIGAAG AANAGLMAAG ILAISDPALG QRLDDWRAAL SASIPEEPSD D
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