Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3025 |
Symbol | |
ID | 5084364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 3096355 |
End bp | 3097863 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640484596 |
Product | hypothetical protein |
Protein accession | YP_001169214 |
Protein GI | 146279055 |
COG category | [C] Energy production and conversion |
COG ID | [COG3488] Predicted thiol oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0498706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCGTC TGCCTGCCCT GCTGGTGATC ATCGCCTTTC CCGCCGCGGC CGAGCCTCTG GATCCGCCGA ACCTGACCAT CCTGCCCCGC ACGGCCGCCG AGACCGCCCG GATTGCGGCC GTTCTCGCAC CGCCCGTCGA TTTCTCGAAG CCCGAGCCCT TCGAGGCGCT GCCCGGCGGC GCGGCCAGCG TGCGCGCCCG CGACACGGCC GACGCCTTCT CGCAATCCTC GGGCAACATG CCGTTCGAGC GCGAGATGGA TTTCAAGCTC GGCAACGGGC TGTTCCGCAA GCTGTGGGTG GCGGCCCCCT CCTCGACGCA GGCCTCGGAC GGGCTCGGCC CGCTCTACAA CGCCCGCGGT TGCCAGAACT GCCACCTGAA GGACGGCCGC GGCCATGTGC CCGAGGGGCC CGAGGATGAG GCGGTCTCGA TGTTCCTGCG CCTTTCCGTC CCCGGCGGTC CCTCTCCCGA GGGCATCGAG GAGTGGATCG CCACCAGCGC CGAACCCACC TATGGCGGGC AGCTTCAGGA CTTTGCCGCC CCCGGTCTGG CACCCGAGGG CCGGATGCGG ATCGACTGGC AGGAGCTGCC CGTCACGCTC GATGACGGCA CGGTGGTGAC GCTGCGCAAG CCCGACTACT CGGTCGAGGA TCTGAATTAC GGCCCGATGG CAAGGGATGT GATGCTCTCG CCCCGCGTCA CGCCGCAGAT GATCGGGCTG GGGCTGCTCG AGGCCATTCC GGCCGCCGAC ATCCTGGCCC ACGCCGACCC CGAGGATCGG GACGGCGACG GCATCTCGGG CCGCCCCAGC ATCACCTGGT CGGCCGAAGC GGATGCGCCG ATGCTCGGCC GGTTCGGCCT CAAGGCGGGG ACGCCCACGG TGCTGCAGCA GTCCGCCTCG GCCTTCGCCG GTGACATGGG GATCGCGAAC GCCCTCTTCC CCGAGCCCTG GGGCGAATGC ACCGAGGCGC AGACCGCCTG CCGCGCCGCG GTCCACGGGA TCGAGCCAGG CAAGCGCGAC GGTCTCGAGA TCGACCGGCA GGGGCTCGAA CTGACGACGT TCTACGCCCG CAACCTCGCC GTGCCCGAGA GGCGCCGGGT GGACGATCCG CAGGTGCTGC GCGGCAAGCA ACTCTTCCAC GAGGCGGGCT GTCCCGCCTG CCATGTGCCC AAGTTCGTGA CCCACCGGCT GAAGGACCAG CCCGAGCAGA GCTTCCAGCT GATCTGGCCC TACACCGATC TGCTGCTGCA CGACATGGGC GAGGGGCTGG CGGACGGCCG CCCCGAGGGT CGGGCCACGG GTCGCGAGTG GCGCACCGCG CCGCTCTGGG GCATCGGCCT GACCGAGCAG GTGAGCGGCC ACGCCAACTT CCTGCACGAT GGCCGTGCGC GGACGATCCT CGAGGCAATC CTCTGGCACG GCGGCGAAGC CGAGGCCGCC CGCGCGCGCG TCATGGCCCT GCCCGCCCCC GACCGCGCGG CCCTCATCGC CTTCGTGGAG GATCTCTGA
|
Protein sequence | MSRLPALLVI IAFPAAAEPL DPPNLTILPR TAAETARIAA VLAPPVDFSK PEPFEALPGG AASVRARDTA DAFSQSSGNM PFEREMDFKL GNGLFRKLWV AAPSSTQASD GLGPLYNARG CQNCHLKDGR GHVPEGPEDE AVSMFLRLSV PGGPSPEGIE EWIATSAEPT YGGQLQDFAA PGLAPEGRMR IDWQELPVTL DDGTVVTLRK PDYSVEDLNY GPMARDVMLS PRVTPQMIGL GLLEAIPAAD ILAHADPEDR DGDGISGRPS ITWSAEADAP MLGRFGLKAG TPTVLQQSAS AFAGDMGIAN ALFPEPWGEC TEAQTACRAA VHGIEPGKRD GLEIDRQGLE LTTFYARNLA VPERRRVDDP QVLRGKQLFH EAGCPACHVP KFVTHRLKDQ PEQSFQLIWP YTDLLLHDMG EGLADGRPEG RATGREWRTA PLWGIGLTEQ VSGHANFLHD GRARTILEAI LWHGGEAEAA RARVMALPAP DRAALIAFVE DL
|
| |