| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3022 |
|---|
| Symbol | |
|---|
| ID | 5084361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 3093489 |
|---|
| End bp | 3094178 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640484593 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001169211 |
|---|
| Protein GI | 146279052 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000385784 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGACGG TGCTGGTGAG CGATCCTTCG GAAAGACTGC TCTCGCTTGA GGGAGTGCGG
AAAAGCTACG CCACGGGCGA GGGGCCGGTT CAGGTCCTGG CCGGGGTGGA CATGACGCTC
GCGCCGGGCG AAAGCCTTGC GCTGACGGGT GAATCCGGCA GCGGCAAGAG CACGCTCCTT
CACCTCGCGG CCGGGCTCGA TTCGGCCGAT GAGGGCCGGA TCGTCGTGGC CGGCCACGAC
ATTTCGCAGG CCGGCGACGC CGAGCGCGCC CGGCTGCGGC GCGGCACCGT GGGGCTCGTC
TTCCAGCAGT TCAACCTGAT CCCCTCGCTC GACGTGGCCG CGAACCTGGC CTTTCAGGCG
AGGCTCGCTG GGCGGCACGA TCCCGAGTGG CAGGCCGAGC TGGCCGATGC GCTCGGTCTG
ACGGCCTGCC TCCACCGCTA CCCCGAACAG CTTTCGGGCG GACAGCAGCA GCGGGTGGCC
ATCGGCCGCA CGCTGGCGGC CCGGCCGCGC CTCGTTCTGG CCGACGAGCC GACGGGCAAT
CTCGACGAGG CGACCGGCGA CGCGGTGATG GCGCTTTTCC TGCGCCTCGT CAGCCAGACC
GGAGCGGGGC TTCTGATGGT CACCCATTCC ACCCGGCTCG CGGGGCGGCT CCACGGCCGG
TTGCAGCTGT CGGCGGGTCG GGTGGCATGA
|
|---|
| Protein sequence | MRTVLVSDPS ERLLSLEGVR KSYATGEGPV QVLAGVDMTL APGESLALTG ESGSGKSTLL
HLAAGLDSAD EGRIVVAGHD ISQAGDAERA RLRRGTVGLV FQQFNLIPSL DVAANLAFQA
RLAGRHDPEW QAELADALGL TACLHRYPEQ LSGGQQQRVA IGRTLAARPR LVLADEPTGN
LDEATGDAVM ALFLRLVSQT GAGLLMVTHS TRLAGRLHGR LQLSAGRVA
|
|---|
| |