| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3018 |
|---|
| Symbol | |
|---|
| ID | 5084617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 3086629 |
|---|
| End bp | 3089013 |
|---|
| Gene Length | 2385 bp |
|---|
| Protein Length | 794 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640484589 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001169207 |
|---|
| Protein GI | 146279048 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2307] Uncharacterized protein conserved in bacteria
[COG2308] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.278023 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.834834 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAGAC GATCCCGACC CGCGCCGGGC CTGCCCGGCC TGACCGCCGG CTACCGCCCC
CGGCCCGGCG TGCCGGACGA GATGATGGAC GCCGCAGGTG GGATCCGCTC CGTCTGGGGC
GGCTTCATGC GGCATCTGGC GGGGCTCGCG CCCGAGGAAC TGGCCCGCCG CTGCGCCCGC
GGCGACCAGT ATCTGCGCGA TGCGGGCGTC TTCTTCCGCC AGTATTCCGC CGAGGGCTCG
GACGAGCGCG TCTGGCCTCT CAGTCACATT CCGGTGCTGA TCGACGAGGC CGAGTGGCAG
CGTCTGGCCG AGGGGCTCGT GCAGCGGGCG CACCTGCTCG AGGCGCTGAT GGCCGACCTC
TACGGGCCGA ACCGGCTGGT GGCCGAGGGC GTGCTGCCGC CGGCGCTGGT GGCCGGCAAC
CCCGAGTGGC TGCGCCCGAT GGTGGGCATC GCGCCCCGCG GCGGGCACCA TCTGCATTTC
CTCGCCTTCG AGGTGGGACG CGGGCCGGAC GGCGACTGGT GGGTGCTGGG CGACCGGGCG
CAGGCGCCCT CGGGCGCGGG CTTCGCGCTC GAGAACCGGG TGGCCACCTC GCGCGCCTTC
TCGGATTTCT ATGCCGAGGC CCATGTCCAC CGTCTCGCAG GCTTCTTCCG CACCTTCCGC
GACGCGCTGC AGGACCTGCA GGCCGATCCG CAAGGCCGGG TGGGGATCCT GACGCCGGGG
CCGCTGAACG AAACCTATTA CGAGCACGCC TGGATCGCGC GCTACCTCGG TTTCATGCTG
CTGCAGGGCG AGGATCTGAC GGTTGACGGC GGTCAACTCA AGGTGCGCAC GGTGGCGGGT
CCGCAGCCTG TGTCGGTGCT CTGGCGCCGG CTCGACGGGG CCTACGCCGA TCCGCTGGAA
CTCGAGGGGG GGTCGCAGCT TGGCACGCCG GGCCTCGTCT CGGCGCTGCG CCACGGCTCG
ACGACGCTGG TCAACAACCT CGGCTCGGGC GTGCTGGAAA CCCGCGCCTT CCTCGCCTTC
ATGCCGCGCA TCGCGCGGGC GCTGCTGGGA ACGGATCTCG CGCTGCCGAA CATCGCGACC
TGGTGGTGCG GGCAGGCGGC GGAGCGCGCT CATGTGGCGG CCCATGCCGA CCGGATGCTG
ATCTCGCCCG CCCTCTCGAC CCGGCAGCCG ATCGAGGACG ATCTCGCCGC ACTGGCCGGG
ACCCGGCTGG CCCCGCGCGA CCCGGCGGAG TTCCTCGACC GCGAAGGGGC AGGGTTCGTC
GGGCAGGAGT CGGTCGTCCT TTCCACCACG CCGGCGCTGA TCGGGGGCCA GCTCGTGCCC
CGGCCGATGA GCCTGCGGGT CTTTCTCGCC CGCACGCCCT CGGGTTGGCA GGTGATGCCC
GGCGGCTTCG CCCGGATCGG GCGGACGCCC GAGCCGCGGG CCATCGCCAT GCAGCGCGGC
GGCGCCGCGG CCGATGTCTG GATCGTGAGC GCGACGCCCG TCGAGGCCGC GAGCCTGATC
CCCGCGCAGG GCCGGCAGCT TCAGGCCCAT GAGGGGCCGC TGCCCGCGCG GGCGGCCGAC
AACCTCTTCT GGCTCGGCCG CTATGTCGAA CGGACCGAAG GGATCATGCG CCTGCTGCGG
GCGCGCAACG TCCGGCTGGC CGAAACGGGC GACGCCAATG CGCCGCTTCT CGCGGCACTG
GCGCCGCTGT TCCGGGGGCA GGGGGTGGAC CCCGAGGAGG GCATCCCCAA GGGGCTGATC
GAGACGCTCC GCTCGGCCAT CGCGAGCGCC GGGCAGGTGC GCGACCGTTT CTCGCCCGAC
GGCTGGTCCT CGCTAGCCGA TCTCGACAAG ACCATGCGGC GCATGGCCGA CCGGGTCGAG
GCGGGCGACG ACGCGGCCCG CGCCCTGTCG GCGCTGCTGC GCAAGATCAC GGGCTTTTCG
GGCCTCGTGC ACGAGAACAT GTATCGCGTG ACCGGCTGGC GCTTTCTCGA ACTTGGGCGC
CATGTCGAGC GCGGCGCCGC CATGGCCGCG GTGCTGGCGA CGCTGGCCGA TCCGTTCGCG
CCCGACGGGG CGCTCGATCT CGCGGTCGAG GTGGGGGATT GCGTGATGAC CCACCGCCGC
CGCTTTGCCG TCACCACCTC GCGCGAGACG GTGGTGGACC TGCTGGCGCT CGACGCGATG
AACCCGCGCT CGATCCTGTT CCAGCTCGAC GGGATCCACG AGCAGGTCAG CTACCTGCCC
GGCGCCACGG CGGGCCCGAT GCCGGACTTC CTCCGCCTTG TCCTGCGGAC CCGCACCAAC
CTCGCGACCG AACGGGCCGA GCAGCTCGAC ACCCGGGCGC TCTGGGCGCT GCGCGGCGCG
ATCTGGGACA TTTCCGATCT GATCACAGAC ACCTGGCTCA GCTGA
|
|---|
| Protein sequence | MERRSRPAPG LPGLTAGYRP RPGVPDEMMD AAGGIRSVWG GFMRHLAGLA PEELARRCAR
GDQYLRDAGV FFRQYSAEGS DERVWPLSHI PVLIDEAEWQ RLAEGLVQRA HLLEALMADL
YGPNRLVAEG VLPPALVAGN PEWLRPMVGI APRGGHHLHF LAFEVGRGPD GDWWVLGDRA
QAPSGAGFAL ENRVATSRAF SDFYAEAHVH RLAGFFRTFR DALQDLQADP QGRVGILTPG
PLNETYYEHA WIARYLGFML LQGEDLTVDG GQLKVRTVAG PQPVSVLWRR LDGAYADPLE
LEGGSQLGTP GLVSALRHGS TTLVNNLGSG VLETRAFLAF MPRIARALLG TDLALPNIAT
WWCGQAAERA HVAAHADRML ISPALSTRQP IEDDLAALAG TRLAPRDPAE FLDREGAGFV
GQESVVLSTT PALIGGQLVP RPMSLRVFLA RTPSGWQVMP GGFARIGRTP EPRAIAMQRG
GAAADVWIVS ATPVEAASLI PAQGRQLQAH EGPLPARAAD NLFWLGRYVE RTEGIMRLLR
ARNVRLAETG DANAPLLAAL APLFRGQGVD PEEGIPKGLI ETLRSAIASA GQVRDRFSPD
GWSSLADLDK TMRRMADRVE AGDDAARALS ALLRKITGFS GLVHENMYRV TGWRFLELGR
HVERGAAMAA VLATLADPFA PDGALDLAVE VGDCVMTHRR RFAVTTSRET VVDLLALDAM
NPRSILFQLD GIHEQVSYLP GATAGPMPDF LRLVLRTRTN LATERAEQLD TRALWALRGA
IWDISDLITD TWLS
|
|---|
| |