| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3010 |
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| Symbol | |
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| ID | 5084610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 3076834 |
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| End bp | 3078525 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640484583 |
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| Product | AAA ATPase |
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| Protein accession | YP_001169201 |
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| Protein GI | 146279042 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.71626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAGCG GAACGCGCTT CCCGCGCTGG CGGCTGGCCT GGATGAGACG ATCCGGCTGG
CCCGGGCCGA GATCGGGGCG CCGCCGCCCG GTCCCGAACA GGACGAGCCG CCCTCGCGGC
CCAACTGAAC GCCGGCGCTG GTCTTGCCCC GCGCCTGCGG CTATGGTCGC GCCCATGCTG
GCCATTTCCT TTTCCGACGA TCAGGCGGAA GCCTACGACC GCGTGGCCGA ACAGCTGCGC
GGGATGGGCG TGGATCTCGC CAACGGAAGC CATTCGGCGC CGGTCGAGGG CAAGAGTTCG
GTGCTCGCGG TGGTGGGCAA GGCCGGATCG GGCAAGACGA TGCTGCTCGC CTCGCTGACG
AAGGCGCTGA CCGAGGCGGG GCTCGAGGTG GTCTCGGGCG ACTGGGAGGG CCGCAAGCGC
AAGGAACGGC GCACCCTCGC CATCCTTGCG CCCACGAACA AGGCGGCCAG CGTGCTGCGT
CTGCGCGGCG TGCCGGCCAC CACGATCCAT CGCATCCTCT ATTCCCCGCT CTACGATCCG
CAGTATGAGC GGATTGCCGA ATGGCTGGCC GGAAACGGCA AGCGGCCCGA GGTCGAGGGC
CTGTCCGAGA CGGCGCTCGA CCGGGCCAAG GCCTTCTACG AGCAGGTGCC CTCCATCCCA
GGTGCGCTGG CCGCGGCGGG TCTGCGCGGG TCCGACTTCA TCAAGGGCTG GAAACGGCGG
GACGAACCGC TCGACGTGGG CTTCGTGGAT GAGGCCTCGA TGCTGGACGA ACGCCAGTTC
GATGACCTGC GCGAGATCTT TCCGACGCTG GTCCTGTTCG GCGATCCGGC GCAGCTGGCG
CCGGTGGGCC AGTCGGGCAA GATGGTCTTC GAGACACTGG GGGAGGCGCG GACGCTGTCC
CTGTCGCGCA TCCACCGGCA GGCCGAGGAC AATCCGATCC TCGATCTCGC CCATGCGCTG
GCCGACCCGG ACCTGAGCTT CGAGCAGTTC GAGGCGATGG TCGAGCGGGC GGCACGCCGG
GACGACCGCG TGCAGGTGGC GCAGAGGGTC GATGCCGGCC TTATGGCGCG CTCTCCGGCG
CTGGTCTGGC GCAACCAGAC GCGGATCCGT CTCATCACCG CCTTCCGCGC CGCCCATGGC
GCGCCCGAGA CCGAGCTTCT GCCGGGCGAG CCGCTGATCT GCGACGGGAT CGAGTTGCCG
CTGAAGCATC GCAAGAAGCG GATCGACCTC GAGGCGCGCG GGCTGATCAA GGGCGCGCAG
GTGATCTATC TCGGCCCCGG CAACCGCGAG GGGTTTGCGA AGCTGCATGT GGTGGGCGCC
GAGGATCCGC AGGTCTCGGC CGCCTCGATC ATCAAGATCG AGAAGCCGGG CGAGGAAGAG
CCCTTCATCC CCTCGGCCGC CCGGATGGGC GCGGCCTTCC TGCACGGATC GGCCGTCACG
ATCCACAAGG CGCAGGGCTC GCAATGGGAG GTGGTGCAGG TCTTCGCCCC CGACCTCTGG
GCCGCCGCGC AGGCGGGCCG GACCGAGGCG GGCGTGCCGC TCTGGAAGCG GCTGGCCTAC
GTCGCCATCA CGCGCGCCGA AAAGCGCCTG ATCTGGGTGG TTCGCAACCG CCTCGCCCTG
CCGCAGCAGC CGCTCTCGGT CGAGGATCTG CCGCGCACCG CCCCGCGGCT GAAGCTGCAG
GCGGAGGAGT AG
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| Protein sequence | MPSGTRFPRW RLAWMRRSGW PGPRSGRRRP VPNRTSRPRG PTERRRWSCP APAAMVAPML
AISFSDDQAE AYDRVAEQLR GMGVDLANGS HSAPVEGKSS VLAVVGKAGS GKTMLLASLT
KALTEAGLEV VSGDWEGRKR KERRTLAILA PTNKAASVLR LRGVPATTIH RILYSPLYDP
QYERIAEWLA GNGKRPEVEG LSETALDRAK AFYEQVPSIP GALAAAGLRG SDFIKGWKRR
DEPLDVGFVD EASMLDERQF DDLREIFPTL VLFGDPAQLA PVGQSGKMVF ETLGEARTLS
LSRIHRQAED NPILDLAHAL ADPDLSFEQF EAMVERAARR DDRVQVAQRV DAGLMARSPA
LVWRNQTRIR LITAFRAAHG APETELLPGE PLICDGIELP LKHRKKRIDL EARGLIKGAQ
VIYLGPGNRE GFAKLHVVGA EDPQVSAASI IKIEKPGEEE PFIPSAARMG AAFLHGSAVT
IHKAQGSQWE VVQVFAPDLW AAAQAGRTEA GVPLWKRLAY VAITRAEKRL IWVVRNRLAL
PQQPLSVEDL PRTAPRLKLQ AEE
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