Gene Rsph17025_2993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2993 
Symbol 
ID5084593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp3058661 
End bp3059542 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content66% 
IMG OID640484565 
Productmethionine aminopeptidase, type I 
Protein accessionYP_001169184 
Protein GI146279025 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0922549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGG AGCCGAAGCT TGACTATCTT GAGACGACAC CGAGACCAGA AGGATCAGGC 
CCAGTGGACG AGTCGCGCGG GCGCATCACC AAGAACGGCA TCCGGATCTA CGAGCCCGAG
GATTACGCCG GCATGCGCAA GGCCGGGCAG GCCGCGGCCG AGATCCTCGA TCTCGTGGGG
CCGCTGGTGC AGCCCGGCGT GACCACCGCC GAAATCGACC GCTTCATCAC CGAAGAGATC
GAACGGCGCG GGATCACCTC GGCCACGATC GGCTACAAGG GCTACCAGCA TGCCTCGTGC
ATCTCGGTCA ACCATGTGGT CTGCCACGGC ATCCCCGCCC AGAAGCTGCT CAAGGACGGC
GACATCCTCA ACATCGACGT GACGGTGATC GTGGATGGCT GGTTCGGCGA CACGAGCCGG
ATGTATGTGG CCGGCACGCT GGGGCGCAAG GCCGAGCGGC TGCTCGAGGT CACGCATGAC
GCGCTGATGA AGGGTATCGA GGTCGTGAAG CCGGGCGCCA CCTTCGGCGA CATCGGGGCC
GCGATCCAGA CCCATGTCGA GAACAACCGC ATGTCGGTCG TGCGCGACTT CTGCGGCCAC
GGGCTCGGGC GCGTCTTTCA TGCGCCGCCG AACGTGCTGC ATTATGGGCG CCCCGGCACC
GGCCCGGTGC TCGAGGAGGG CATGATCTTC ACCATCGAGC CGATGGTGAA CCTCGGCCGT
CCCGAGACGA AGGTGCTGGC CGACGACTGG ACCGCGGTGA CGCGGGACAA GTCGCTCTCG
GCGCAGTTCG AACATTCGGT CGGCGTGACG GCGGACGGCT GCGAGATCTT CACCCTTTCC
CCCGCGGGCC TCTTCTACCC GACCTGGCCC GTATCGGGTT AG
 
Protein sequence
MAKEPKLDYL ETTPRPEGSG PVDESRGRIT KNGIRIYEPE DYAGMRKAGQ AAAEILDLVG 
PLVQPGVTTA EIDRFITEEI ERRGITSATI GYKGYQHASC ISVNHVVCHG IPAQKLLKDG
DILNIDVTVI VDGWFGDTSR MYVAGTLGRK AERLLEVTHD ALMKGIEVVK PGATFGDIGA
AIQTHVENNR MSVVRDFCGH GLGRVFHAPP NVLHYGRPGT GPVLEEGMIF TIEPMVNLGR
PETKVLADDW TAVTRDKSLS AQFEHSVGVT ADGCEIFTLS PAGLFYPTWP VSG