Gene Rsph17025_2972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2972 
Symbol 
ID5085175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp3037264 
End bp3038646 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content67% 
IMG OID640484543 
Productaminotransferase class-III 
Protein accessionYP_001169163 
Protein GI146279004 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.121159 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAAG GCTTGGCACA GGCGAACGAC CTCAGCGAGG TCATCGAGGC CGACCGCGCG 
CACATGTGGC ACCACCTGAG CCAGCACAAG CAATATGAGA CGGTCGATCC CCGGATCATC
GTCGAAGGCA AGGGCATGCG CGTCTGGGAC GCGGCGGGCA AGGAGTATCT CGACGCGGTC
TCGGGCGGCG TCTGGACGGT CAACGTGGGC TACGGCCGCG AGAGCATCGC CAACGCCGTG
CGCGACCAGC TGATCCGCAT GAACTATTTC GCCCATTCCG CGGGCTCGAT CCCGGCCTCG
CTCTTCTCGA AGCGGCTGAT CGAGAAGATG CCGGGCCTCT CGCGCGTCTA TTACTCGAAC
TCGGGCTCCG AGGCGAACGA GAAGGTCTAC AAGATGGTGC GCCAGATCTC GCACCGGCAC
CACGGCGGGC GCAAGAACAA GATCCTGTTC CGCGAACGCG ACTACCACGG CACCACGATC
ACCGCGCTCG CCACCTCCGG CCAGCCCCAG CGCGCCGAGC AGTACGGCCC CCTGACGCCG
GGCTTCGTGA TGGTCCCGCA CTGCCTCGAA TACCGCAAGC AATGGGACGT CGAGAACTAC
GGCGAGCGGG CGGCCGACGC GATCGAAGAG GTGATCCTGC GCGAGGGCCC CGACACGATC
GGCGCGCTCT GCCTCGAGCC TGTGACGGCG GGCGGCGGCG TGATCGTGCC CCCGGCCGGC
TACTGGGAGC GGGTGCAGGA GATCTGCCGG AAATACGAGA TCCTTCTGCA CATCGACGAG
GTGGTCTGCG GTCTCGGCCG CACCGGTACC TGGTTCGGCT ACCAGAACTT CGGGGTGAAG
CCCGATTTCG TGACCATGGC CAAGGGCGTG GCCTCGGGCT ACGCCGCCAT CTCCTGCACG
GTCACGACCG AGGCCGTGTT CGAGATGTTC AAGGACAACC CGGACGATCC GATGAGCTAC
TTCCGCGACA TCTCGACCTT CGGCGGCTGC ACCGCAGGGC CGGTCGCGGC GCTCGAGAAC
ATGCGGATCA TCGAGGAGGA GGGCCTGCTC GAGAACACGC TGAAGATGGG CGCGCGCGTG
ATCGCGAACC TCACCGCGCT GCAGGAGAAG CACGCCGTGA TCGGTGACGT GCGCGGCAAG
GGCCTGTTCT GCGGGGCGGA ACTGGTGGCC GACCGGGCCA CGAAGGAGCC CATGGACGAA
AGGCGCGTGG CGGCCGTGGT GGCCGACGTG AACGCGCAGG GCGTCATCAT CGGCATGACC
AACCGCAGCC TGCCGGGCTT CAACAACACG CTCTGCCTGT CTCCGGCGCT GATCGCCACG
CCCGACGACA TCGACCAGAT CACGGATGCG ATCGACCGCG CCCTGACCCG CGTCTTCGGC
TGA
 
Protein sequence
MMEGLAQAND LSEVIEADRA HMWHHLSQHK QYETVDPRII VEGKGMRVWD AAGKEYLDAV 
SGGVWTVNVG YGRESIANAV RDQLIRMNYF AHSAGSIPAS LFSKRLIEKM PGLSRVYYSN
SGSEANEKVY KMVRQISHRH HGGRKNKILF RERDYHGTTI TALATSGQPQ RAEQYGPLTP
GFVMVPHCLE YRKQWDVENY GERAADAIEE VILREGPDTI GALCLEPVTA GGGVIVPPAG
YWERVQEICR KYEILLHIDE VVCGLGRTGT WFGYQNFGVK PDFVTMAKGV ASGYAAISCT
VTTEAVFEMF KDNPDDPMSY FRDISTFGGC TAGPVAALEN MRIIEEEGLL ENTLKMGARV
IANLTALQEK HAVIGDVRGK GLFCGAELVA DRATKEPMDE RRVAAVVADV NAQGVIIGMT
NRSLPGFNNT LCLSPALIAT PDDIDQITDA IDRALTRVFG