Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2948 |
Symbol | hslU |
ID | 5085151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 3008617 |
End bp | 3009918 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640484519 |
Product | ATP-dependent protease ATP-binding subunit HslU |
Protein accession | YP_001169139 |
Protein GI | 146278980 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.474337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.124858 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC TGACCCCGCG CGAGATCGTC TCGGAGCTTG ACCGCTTCAT CATCGGCCAG AAGGACGCCA AGCGCGCCGT GGCCGTGGCG CTGCGCAACC GCTGGCGCAG GAAGCAGCTG TCCGACGACA TCCGCGACGA AGTTTACCCG AAGAACATCC TGATGATCGG CCCGACCGGC GTCGGCAAGA CCGAGATCTC GCGCCGTCTG GCCCGGCTCG CGAAGGCGCC CTTCCTGAAG GTCGAGGCCA CCAAGTTCAC CGAGGTGGGC TATGTCGGCC GCGACGTGGA CAGCATCATC CGCGATCTGG TCGATGCCGC CATCGTCGAG ACCCGCGCCC GGATGCGCGA GGATGTGAAG AGCCGCGCGG TGAAGGCCGC CGAGGACCGC GTGATCGAGG CGATCGCGGG CCGGGATGCG CGCGAGCAGA CCCGCGAGAT GTTCCGCGGC AAGCTGAAGC GGGGCGAACT GGACGCGACC GTGATCGAGG TCGAGGTGGC CGACACCTCG AACCCGATGC AGATGCTCGA CCCCACCGGC CAGGGCCAGA TGGGGATGAT GAACCTGGGC GAGATCTTCG GGAAGGCCTT CGGCGGCCGC ACCACCCGGC GCAAGATGAC GGTGGCCGAA AGCCACGACA TCCTGATGAA CGAGGAGGCC GACAAGCTTC TCGACGATGA GGTGGTGAAG GCCACCGCGC TCGAGGCCGT GCAGGAGAAC GGCATCGTCT TCATCGACGA GATCGACAAG GTCTGCGCGC GGTCGGACAT GCGGGGGGCC GACGTCAGCC GCGAGGGCGT GCAGCGCGAC CTGCTGCCGC TGATCGAGGG CACGACGGTC TCGACCAAGT ATGGCCCGGT CAAGACCGAC CATATCCTGT TCATCGCGAG CGGCGCCTTC CACATCGCCA AGCCCTCGGA CCTGTTGCCC GAGCTTCAGG GCCGCCTGCC GATCCGGGTG GAACTGCGCG CGCTGACCGA AGAGGATTTC GTCCGCATCC TCTCGGAGAC GGACAATGCG CTGACACGGC AATACAAGGC GTTGATGAAG ACCGAGAAGG TGGGGATCAC CTTCACCGAG GAGGGGATCA AGGCGCTCGC CTCGATCGCG GCCGAGGTCA ACCGCTCGGT CGAGAACATC GGCGCCCGGC GACTCTATAC GGTGATGGAG CGGGTGTTCG AGGAGCTGTC CTTCCACGCG CCTGACCGCT CGGGCGAGGA GGTCACGGTG GATGCGGCCT ATGTCGAGAA GAACCTTGGC GAACTGGCCC GCTCGACCGA TCTGAGCCGC TACGTCCTTT GA
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Protein sequence | MTDLTPREIV SELDRFIIGQ KDAKRAVAVA LRNRWRRKQL SDDIRDEVYP KNILMIGPTG VGKTEISRRL ARLAKAPFLK VEATKFTEVG YVGRDVDSII RDLVDAAIVE TRARMREDVK SRAVKAAEDR VIEAIAGRDA REQTREMFRG KLKRGELDAT VIEVEVADTS NPMQMLDPTG QGQMGMMNLG EIFGKAFGGR TTRRKMTVAE SHDILMNEEA DKLLDDEVVK ATALEAVQEN GIVFIDEIDK VCARSDMRGA DVSREGVQRD LLPLIEGTTV STKYGPVKTD HILFIASGAF HIAKPSDLLP ELQGRLPIRV ELRALTEEDF VRILSETDNA LTRQYKALMK TEKVGITFTE EGIKALASIA AEVNRSVENI GARRLYTVME RVFEELSFHA PDRSGEEVTV DAAYVEKNLG ELARSTDLSR YVL
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