Gene Rsph17025_2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2948 
SymbolhslU 
ID5085151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp3008617 
End bp3009918 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content66% 
IMG OID640484519 
ProductATP-dependent protease ATP-binding subunit HslU 
Protein accessionYP_001169139 
Protein GI146278980 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit 
TIGRFAM ID[TIGR00390] ATP-dependent protease HslVU, ATPase subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.474337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.124858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC TGACCCCGCG CGAGATCGTC TCGGAGCTTG ACCGCTTCAT CATCGGCCAG 
AAGGACGCCA AGCGCGCCGT GGCCGTGGCG CTGCGCAACC GCTGGCGCAG GAAGCAGCTG
TCCGACGACA TCCGCGACGA AGTTTACCCG AAGAACATCC TGATGATCGG CCCGACCGGC
GTCGGCAAGA CCGAGATCTC GCGCCGTCTG GCCCGGCTCG CGAAGGCGCC CTTCCTGAAG
GTCGAGGCCA CCAAGTTCAC CGAGGTGGGC TATGTCGGCC GCGACGTGGA CAGCATCATC
CGCGATCTGG TCGATGCCGC CATCGTCGAG ACCCGCGCCC GGATGCGCGA GGATGTGAAG
AGCCGCGCGG TGAAGGCCGC CGAGGACCGC GTGATCGAGG CGATCGCGGG CCGGGATGCG
CGCGAGCAGA CCCGCGAGAT GTTCCGCGGC AAGCTGAAGC GGGGCGAACT GGACGCGACC
GTGATCGAGG TCGAGGTGGC CGACACCTCG AACCCGATGC AGATGCTCGA CCCCACCGGC
CAGGGCCAGA TGGGGATGAT GAACCTGGGC GAGATCTTCG GGAAGGCCTT CGGCGGCCGC
ACCACCCGGC GCAAGATGAC GGTGGCCGAA AGCCACGACA TCCTGATGAA CGAGGAGGCC
GACAAGCTTC TCGACGATGA GGTGGTGAAG GCCACCGCGC TCGAGGCCGT GCAGGAGAAC
GGCATCGTCT TCATCGACGA GATCGACAAG GTCTGCGCGC GGTCGGACAT GCGGGGGGCC
GACGTCAGCC GCGAGGGCGT GCAGCGCGAC CTGCTGCCGC TGATCGAGGG CACGACGGTC
TCGACCAAGT ATGGCCCGGT CAAGACCGAC CATATCCTGT TCATCGCGAG CGGCGCCTTC
CACATCGCCA AGCCCTCGGA CCTGTTGCCC GAGCTTCAGG GCCGCCTGCC GATCCGGGTG
GAACTGCGCG CGCTGACCGA AGAGGATTTC GTCCGCATCC TCTCGGAGAC GGACAATGCG
CTGACACGGC AATACAAGGC GTTGATGAAG ACCGAGAAGG TGGGGATCAC CTTCACCGAG
GAGGGGATCA AGGCGCTCGC CTCGATCGCG GCCGAGGTCA ACCGCTCGGT CGAGAACATC
GGCGCCCGGC GACTCTATAC GGTGATGGAG CGGGTGTTCG AGGAGCTGTC CTTCCACGCG
CCTGACCGCT CGGGCGAGGA GGTCACGGTG GATGCGGCCT ATGTCGAGAA GAACCTTGGC
GAACTGGCCC GCTCGACCGA TCTGAGCCGC TACGTCCTTT GA
 
Protein sequence
MTDLTPREIV SELDRFIIGQ KDAKRAVAVA LRNRWRRKQL SDDIRDEVYP KNILMIGPTG 
VGKTEISRRL ARLAKAPFLK VEATKFTEVG YVGRDVDSII RDLVDAAIVE TRARMREDVK
SRAVKAAEDR VIEAIAGRDA REQTREMFRG KLKRGELDAT VIEVEVADTS NPMQMLDPTG
QGQMGMMNLG EIFGKAFGGR TTRRKMTVAE SHDILMNEEA DKLLDDEVVK ATALEAVQEN
GIVFIDEIDK VCARSDMRGA DVSREGVQRD LLPLIEGTTV STKYGPVKTD HILFIASGAF
HIAKPSDLLP ELQGRLPIRV ELRALTEEDF VRILSETDNA LTRQYKALMK TEKVGITFTE
EGIKALASIA AEVNRSVENI GARRLYTVME RVFEELSFHA PDRSGEEVTV DAAYVEKNLG
ELARSTDLSR YVL