Gene Rsph17025_2938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2938 
Symbol 
ID5084538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2997107 
End bp2997856 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content70% 
IMG OID640484509 
Producthypothetical protein 
Protein accessionYP_001169129 
Protein GI146278970 
COG category[S] Function unknown 
COG ID[COG3496] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.064452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.193672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGCCG AGCATGTTCA GGGTGAGACC TTTCATGAGC GCAAGGGCGC GCTCGGGAAC 
AGCTTCCGCT ACGGGGTGGA TTACCTGATC GTCGATCCCG AGGCGGTCGA GGGGCCCGCG
CTCTTCTCGC GGAACCGGGC CAACCTGATC GCGCTGCACG ACCGCGACTA CGGCGGTGAG
CCGGGGCAGG GCCGGGGCGT AGCCTGGGTG CGCGAGGTGC TGGCGGCGCA GGGGATGGCT
CCGGCCGCAC GCATCCTTCT GCTGACACAG CCGCGGGTGA TGGGCCATGT GTTCAACCCG
GTCAGCTTCT GGCTCTGCCA CGATGCCGAG GGGACGCTGC GCACCGTCAT CGCCGAGGTG
AGCAACACCT TCGGCGACCG TCACTGGTAT CTCTGCGCCA AGGAAGACGG CTCGGTCATC
GAGCGGACGG ACACGCTGAC GGCGGCCAAG ATCATGCATG TCTCGCCCTT CCAGCCGATC
GAGGGCGGCT ACCGCTTCCG CTTCGACATC CGCGAGGACC GGGTGGGGGT CTGGATCGAC
TACAACTTCG CCGAGGGCGG GCTCTATGCC ACGCTGACGG GGCGTCGGGC GCCGCTGACG
AACGCCGGCA TCCTGCGGGC CTGCCTGCGC CGGCCCTTCG GCTCGCGGCG GGTGCTGGCG
CTGATCCACT GGCAGGCGCT GAAGCTCGCG CTGAAGGGCG CCCGCTACCG CAGCCGGCCG
GCGCCGCCGC TGCAAGACGT GACCCGGTGA
 
Protein sequence
MWAEHVQGET FHERKGALGN SFRYGVDYLI VDPEAVEGPA LFSRNRANLI ALHDRDYGGE 
PGQGRGVAWV REVLAAQGMA PAARILLLTQ PRVMGHVFNP VSFWLCHDAE GTLRTVIAEV
SNTFGDRHWY LCAKEDGSVI ERTDTLTAAK IMHVSPFQPI EGGYRFRFDI REDRVGVWID
YNFAEGGLYA TLTGRRAPLT NAGILRACLR RPFGSRRVLA LIHWQALKLA LKGARYRSRP
APPLQDVTR