Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2923 |
Symbol | |
ID | 5084523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2980357 |
End bp | 2981094 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640484494 |
Product | periplasmic protein-like protein |
Protein accession | YP_001169114 |
Protein GI | 146278955 |
COG category | [S] Function unknown |
COG ID | [COG3698] Predicted periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.161015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.147851 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGACTA GGCTCGTCGC GCTCGCCCTC GCGCTCTGGC CGGCGGCCTG TGCGACGGCC GAGCCGGCCT GCCGTGACCT GACCTTCGAG GGCACGCGCT ACAGCCTGTG CGAAGCACAG GCCGGCGACG ACATCCGCCT GTTCCAGACC GCGCCCGACG GCAAGCCCTA CGGCAGCTTC GAGCGGATCA ACAGCGCGCT CGCCCCGGAG GGGCGGCAGC TTGCCTTTGC CATGAACGCC GGCATGTATC ACGCCGACCG CCGGCCGGTG GGGCTGCTGG TCGAGGAGGG CTTTGAGCGT GCGCCGATCG TGACCTCGGC CGGTCCGGGC AATTTCGGGA TGCTGCCCAA TGGCGTCTTC TGCGTGGGCG AAGGTTACCG CGTGATCGAG TCGCGCGCCT TTGCGGCCGA GCGGCCCGCC TGCCGCTTCG CCAGCCAGTC GGGCCCGATG CTGGTGATCG GGGGCAAGCT GCATCCGCGC TTTCTGGTGG ACAGCGATTC GCGCTATGTG CGCAACGGCG TGGGCGTCAG CGCCGACGGC AGCCGCGCCG TCTTCGCGAT CTCGAATCGC CCGGTCACCT TCCACGAGTT CGGACGCCTC TTCCGGGATG CCCTGGAGCT GCCCGACGCA CTCTATTTCG ACGGCTCGAT CTCGCGCCTC TACGACCGCG GCGCGCGCCG GTCGGACTGG GGCACGCCGA TGGGCCCCAT CGTGGGGCTG GTGGTTCCGA CGCCCTGA
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Protein sequence | MRTRLVALAL ALWPAACATA EPACRDLTFE GTRYSLCEAQ AGDDIRLFQT APDGKPYGSF ERINSALAPE GRQLAFAMNA GMYHADRRPV GLLVEEGFER APIVTSAGPG NFGMLPNGVF CVGEGYRVIE SRAFAAERPA CRFASQSGPM LVIGGKLHPR FLVDSDSRYV RNGVGVSADG SRAVFAISNR PVTFHEFGRL FRDALELPDA LYFDGSISRL YDRGARRSDW GTPMGPIVGL VVPTP
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