| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2854 |
|---|
| Symbol | |
|---|
| ID | 5084232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 2911284 |
|---|
| End bp | 2912813 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640484424 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_001169045 |
|---|
| Protein GI | 146278886 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATCT ACGTCCCCCG CGATGCGGCG GCAAAGGCGG TGGGCGCTGA CGCGGTCGCA
GCGGCCATCG AGGCCGAAGC CGGGCGGCGC GGCCTGCCGC TCACGCTGGT GCGCAACGGG
TCGCGCGGGA TGGTCTGGCT CGAGCCGCTG GTCGAGATCC AGACCGAGGC CGGGCGCATG
GCCTTCGGGC CTGTCACCCC GGAGGACGTG CCCGCCCTGT TCGATGCGGA CTGGAAACGG
CATCCGCTGG CGCTCGGCCC GACCGAGGAA CTGCCCTGGC TGATGATGCA GACCCGCCTG
ACCTTCGCGC GCTGCGGGAT CACCGATCCG CTCTGCCTCG AGGAGTATGA GGCGCACGGC
GGCTTCGAGG GGCTCCACCG CGCCATCGGC ATGAGCCGCG CCGAGATCCT GCAGGAGGTG
ATCGAGTCAG GGCTCCGCGG GCGGGGCGGC GCGGGCTTTC CCACCGGCAT CAAGTGGAAG
ACCGTTTCCG AGGCGCAGGC GGATCAGAAA TACATCGTCT GCAACGCGGA CGAGGGCGAC
AGCGGCACCT TCGCCGACCG GATGATCATG GAGGGCGACC CCTTCACCCT GATCGAGGGC
ATGACCATCG CCGGCCTCGC GACCGGCGCC ACGCGCGGCT ATGTCTACAT GCGGTCGGAA
TATCCCGATG CGGTCGAGGT GATGATCGAG GCCGTCCGCA TCGCCCGCGG CCACGGGCTG
CTCGGGCCCT CGGTCATGGG CTCGGGCCGC GCCTTCGACA TGGAGATCCG CGTCGGCGCG
GGGGCCTATG TCTGCGGCGA AGAGACGTCG CTGCTGAACT CGCTCGAGGG CAAGCGCGGC
GTGGTGCGCG CCAAGCCGCC GCTTCCGGCG CTCGAGGGCT TCCTCGGCAA GCCGACGGTT
GTCAACAACG TGATCTCGCT CGCCTCGATC CCGGTGATCT TCCAGAAGGG CGCGGCCTAC
TACCGCGACT TCGGCCTCGG CCGGTCGCGC GGCACGATCC CGCTGCAGAT CGCGGGCAAT
GTGAAGCGCG GCGGCCTGTT CGAGATCGCC TTCGGCATGA GCCTCGGCCA GATCGTCGAT
GACATCGCGG GCGGCACCGC CTCGGGGCGG CCGGTCAAGG CGGTGCAGGT CGGCGGGCCG
CTGGGGGCCT ATTTCCCGCG CGCCCTCTTC GACACGCCCT TCTGCTACGA GGAGTTCGCG
GGCGCCGAGG GCCTTGTGGG GCACGCCGGC ATCGTCGTCT TCGACGATAC GGCCGACATG
CTGAAGCAGG CGCGCTTCGC CATGGAGTTC TGCGCCATCG AGAGCTGCGG GAAATGCACG
CCCTGCCGCA TCGGCGCGGT GCGCGGCATG GAGACGGTGG ACCGGATCGC CCGCGGCGAC
GCGGCGGCGA TCCCGCTTCT CACGGATCTG TGCGCCACGA TGAAATCGGG ATCGCTTTGC
GCCCTGGGCG GTTTCACCCC TTATCCGGTC ATGAGCGCCC TCACCCACTT CCCGGACGAT
TTCGCCCCGA TGAAGGAGGC AGCCGAATGA
|
|---|
| Protein sequence | MRIYVPRDAA AKAVGADAVA AAIEAEAGRR GLPLTLVRNG SRGMVWLEPL VEIQTEAGRM
AFGPVTPEDV PALFDADWKR HPLALGPTEE LPWLMMQTRL TFARCGITDP LCLEEYEAHG
GFEGLHRAIG MSRAEILQEV IESGLRGRGG AGFPTGIKWK TVSEAQADQK YIVCNADEGD
SGTFADRMIM EGDPFTLIEG MTIAGLATGA TRGYVYMRSE YPDAVEVMIE AVRIARGHGL
LGPSVMGSGR AFDMEIRVGA GAYVCGEETS LLNSLEGKRG VVRAKPPLPA LEGFLGKPTV
VNNVISLASI PVIFQKGAAY YRDFGLGRSR GTIPLQIAGN VKRGGLFEIA FGMSLGQIVD
DIAGGTASGR PVKAVQVGGP LGAYFPRALF DTPFCYEEFA GAEGLVGHAG IVVFDDTADM
LKQARFAMEF CAIESCGKCT PCRIGAVRGM ETVDRIARGD AAAIPLLTDL CATMKSGSLC
ALGGFTPYPV MSALTHFPDD FAPMKEAAE
|
|---|
| |