| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2842 |
|---|
| Symbol | |
|---|
| ID | 5084220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 2895980 |
|---|
| End bp | 2897413 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640484412 |
|---|
| Product | amidase |
|---|
| Protein accession | YP_001169033 |
|---|
| Protein GI | 146278874 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.779137 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACA CCTCCCTCGC CTATCTCGGC GCCACGCAAC TGACAGCTCT TTACGCCGCC
CGGAAAATCT CGCCGGTCGA GGTGGTGAGC GAGCTGCTCT CGCGGATCGA GGCCAGTGCC
GCCACGCTGA ACGCGGTCTG CTTCACCTAT GCCGAGGAGG CGCTGGAGGC CGCGCGGCAG
TCCGAGGCGC GCTACATGTC GGGCGCGCAG AAACCGGGCA GGATCGACGG CGTTCCGACC
GCGCTCAAGG ACGGGACCAT GATGGCGGGC AAGGTCACCA CCTACGGCTC GCTGCTTTAT
GCGGACCATG TGGCGGCGAA GAGCGCGCCG GTCGTGCAGC GGCTGGTGGA GGCGGGCGCG
GTGATCCATG CCCGCACCAC CACGCCGGAA TTCTCCTGCG CCCCCTTCTG CCACTCGCGG
CAATGGGGCG TGACGCGCAA TCCCTGGAAC CCCGCCTTCA CGCCCGGCGG CTCTTCGGGC
GGTTCCGGGG CGGCGCTGGC GGCGGGCCTC GCACCGCTCG CCACGGGCTC GGACATCGGC
GGCTCGATCC GAATCCCCGC CTCGGCCTCG GGGGTCGTGG GCTTCAAGCC GCCCTACGGC
CGCGTGCCCT CCACGCCGCC CTTCAACCTC GATCCCTACA ACCATCCCGG CCCCATGGCG
CGCACCGTCG AGGATTGCCT GCTGATGCAG AACGTGCTCG CCGGGCCGCA TCCCGAAGAC
ATCGCCTCCC TGAAGCCGAA GCTCGAGCTG CGCCTCGACC GTTCAGAGGT GAAGGGCTGG
AAGATCGCCT ATTCGCTGGA TTTCGGCTTC ATGCAGATCG ATCCGGCGGT TCGGGCCAAC
ACGCTCGCCG CGCTGGAGGT GTTCCGCGCG CTCGGCGCCG AGGTCACGGA GGTGGCGCTC
CCCTGGTCCT GGGAGGTCTA TCGGGCCGCC GCCACCCATC ACAGGGCGCT CTTCGGCGCC
TGGCTCGCCG AGTATCTGGA CGAGCGGGAG GACCGGCTGA CCTCCTACGC ACGCCGCTTC
GCCCGCGAGT CGCTCGCCAC CACCACCCGC GACTATCTCG CCGGGATGGA GGTGGAAGGG
CGGATCTGGT CGCATTTCGG CCCGATGATG GAAGGGTTCG ACCTGTTCCT CTGCCCCACG
CTCGCGATCC CCGCCGTGCC GGCCGAGTTC GATTTCTCCG ATCCGCTGGT CATCAACGGG
CAGCAGATCG ATTCCTATCT CGGCTGGACC ATGGCCTTGC CCTTCAACAT GCTCAGCCGC
TGCCCGGTCC TCTCCGTGCC CTCGGGCCAT GCCCCGAACG GCGTGCCGAC CGGCATTCAG
CTGGTGGGCC GGACCTACGA CGACCAGACC GTCTTCACCG CGGGCCTCGC CTACGAGGCC
GCCACCGGCG GCTGGTATGG CACCGCTGCC ACCCGCCCCT CCCTGCCCTT CTGA
|
|---|
| Protein sequence | MSDTSLAYLG ATQLTALYAA RKISPVEVVS ELLSRIEASA ATLNAVCFTY AEEALEAARQ
SEARYMSGAQ KPGRIDGVPT ALKDGTMMAG KVTTYGSLLY ADHVAAKSAP VVQRLVEAGA
VIHARTTTPE FSCAPFCHSR QWGVTRNPWN PAFTPGGSSG GSGAALAAGL APLATGSDIG
GSIRIPASAS GVVGFKPPYG RVPSTPPFNL DPYNHPGPMA RTVEDCLLMQ NVLAGPHPED
IASLKPKLEL RLDRSEVKGW KIAYSLDFGF MQIDPAVRAN TLAALEVFRA LGAEVTEVAL
PWSWEVYRAA ATHHRALFGA WLAEYLDERE DRLTSYARRF ARESLATTTR DYLAGMEVEG
RIWSHFGPMM EGFDLFLCPT LAIPAVPAEF DFSDPLVING QQIDSYLGWT MALPFNMLSR
CPVLSVPSGH APNGVPTGIQ LVGRTYDDQT VFTAGLAYEA ATGGWYGTAA TRPSLPF
|
|---|
| |