| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2831 |
|---|
| Symbol | |
|---|
| ID | 5085109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 2881373 |
|---|
| End bp | 2881747 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640484401 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001169022 |
|---|
| Protein GI | 146278863 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.182633 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.128352 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGG AAAATCCGGA TCTGTGGTTC ACCGATGCGA TCGCCACCTT CGGTGACCGC
CTGGCCGCGG CGCGCGAGGC GGCGGGTCTT ACGGAGGCGG CGGCCGCGGC CGCGCTGGGC
GTCGCGCCCG CGATCTACGA CGGCTGGGAG AAGGACGCGG CGATGCCTCG CGCCAACCAG
GTCCACATCC TTTCCGGCAT CCTCGGCGTG TCTCTGACCT GGCTGCTGAC CGGAGAGGGG
CCAGGACTGT CCGGCCCCGA CGATGCGCAC GCAGAGGCGG CGATCGCACG GCTGACCGAA
GACCTTGCCG AAACCCACGC CAGGATGCAG CTGCTCGAGG CCCGCGTCCG GCAGATGATG
ATGCGCCTCG AATAG
|
|---|
| Protein sequence | MNAENPDLWF TDAIATFGDR LAAAREAAGL TEAAAAAALG VAPAIYDGWE KDAAMPRANQ
VHILSGILGV SLTWLLTGEG PGLSGPDDAH AEAAIARLTE DLAETHARMQ LLEARVRQMM
MRLE
|
|---|
| |