Gene Rsph17025_2816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2816 
Symbol 
ID5085095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2860640 
End bp2861113 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content65% 
IMG OID640484381 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_001169008 
Protein GI146278849 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.651066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.235425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAACGA CACTTCTCGC GCTTGGAACG GCCGCCATTC TCGCGGCCCC TGCCTTTGCC 
CAGACCGGAG ACATCGTCGA GACCGCCACG GGTGCGGGCA ATTTCACGAC CCTGCTGGCC
GCAGCCGAGG CCGCGGATCT GGTCGAAACG CTGAAGGGTG AGGGGCCCTT CACGGTCTTC
GCGCCCACGG ATGCGGCCTT TGCGGCCCTG CCCGAAGGCA CGGTCGAGGA TCTGCTGAAG
CCCGAGAACA AGGAACGGCT GACCGAGATC CTGACCTACC ACGTCGTCCC CGGAGAGGTC
ATGTCATCCG ATCTTTCCGA AGGCATGACC GCCGAAACCG TGCAGGGAGG CGAACTCACC
ATCACGCTCG AGGGCGGCCC GAAGGTGAAT GGCACCGCGA TCTCGCAGCC GGACGTGGAT
GCCTCGAACG GGGTGATCCA TGTGATCGAC GGCGTGCTGA TGCCGGGCGC CTGA
 
Protein sequence
MRTTLLALGT AAILAAPAFA QTGDIVETAT GAGNFTTLLA AAEAADLVET LKGEGPFTVF 
APTDAAFAAL PEGTVEDLLK PENKERLTEI LTYHVVPGEV MSSDLSEGMT AETVQGGELT
ITLEGGPKVN GTAISQPDVD ASNGVIHVID GVLMPGA