Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2809 |
Symbol | |
ID | 5085088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 2854117 |
End bp | 2854998 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640484374 |
Product | band 7 protein |
Protein accession | YP_001169001 |
Protein GI | 146278842 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.361864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.174393 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCCG CGGATTTCAT CGGCGGCAAC GCCGTCCTTC TGGCACTGGC GGCCTTCCTC ATCCTCTGTG TCTTTCTGGG CGTGCGGATC GTGCCCCAGT CGCAAAAGCA TGTGGTCGAG CGGTTCGGCC GACTGCGGGC GGTGCTGGGG CCCGGAATCA ACTTCGTGGT GCCGTTCCTC GATGTGGTCG CTCACAAGAT TTCGATCCTC GAACGACAGC TGCCCAACGC CATGCAGGAT GCGATCACCG CCGACAACGT GCTGGTGAAG GTCGAGACCT CCGTCTTCTA CCGCATCACC GAGCCTGAAA AGACGGTGTA CCGGATCCGC GACGTGGATG GGGCCATCGC CACGACCGTC GCCGGGATCG TCCGGTCCGA GATCGGCAAG CTCGAGCTTG ATCAGGTCCA GTCGAATCGG GCGGACCTGA TCTTCAAGGT GCGCGAGCAG GTGGCCGCCA TGGTGGACGA CTGGGGCATC GAGGTGACGC GGGCCGAGGT TCTCGATGTC AATCTCGACG ATGCGACCCG CGCCGCGATG CTGCAGCAGC TGAACGCCGA ACGCGCGCGG CGCGCGCTCG TGACCGAGGC CGAGGGCCGC AAGCGCGCGG TGGAACTGAA TGCCGACGCC GAACTTTATG CCGCCGAGCA GGAGGCCAAG GCGCGTCGCG TCCTCGCCGA CGCCGAGGCC TACGCCACCG GCGTCATCGC TGTGGCCATC CGCGAGAACG GGCTTGAGGC CGCGCAGTAT CAGGTGGCGT TGAAGCAGGT GGAGGCGCTG ACCGCCGTGG GCAAGGGGGA TGGCAAGCAG CTTGTCGTCG TGCCGGCATC GGCGATGGAC GCGTTCGCGG ACGCCTTCAA GATGCTCAAG GGGCGCGCAT GA
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Protein sequence | MEPADFIGGN AVLLALAAFL ILCVFLGVRI VPQSQKHVVE RFGRLRAVLG PGINFVVPFL DVVAHKISIL ERQLPNAMQD AITADNVLVK VETSVFYRIT EPEKTVYRIR DVDGAIATTV AGIVRSEIGK LELDQVQSNR ADLIFKVREQ VAAMVDDWGI EVTRAEVLDV NLDDATRAAM LQQLNAERAR RALVTEAEGR KRAVELNADA ELYAAEQEAK ARRVLADAEA YATGVIAVAI RENGLEAAQY QVALKQVEAL TAVGKGDGKQ LVVVPASAMD AFADAFKMLK GRA
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