Gene Rsph17025_2809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2809 
Symbol 
ID5085088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2854117 
End bp2854998 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content66% 
IMG OID640484374 
Productband 7 protein 
Protein accessionYP_001169001 
Protein GI146278842 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.361864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.174393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCG CGGATTTCAT CGGCGGCAAC GCCGTCCTTC TGGCACTGGC GGCCTTCCTC 
ATCCTCTGTG TCTTTCTGGG CGTGCGGATC GTGCCCCAGT CGCAAAAGCA TGTGGTCGAG
CGGTTCGGCC GACTGCGGGC GGTGCTGGGG CCCGGAATCA ACTTCGTGGT GCCGTTCCTC
GATGTGGTCG CTCACAAGAT TTCGATCCTC GAACGACAGC TGCCCAACGC CATGCAGGAT
GCGATCACCG CCGACAACGT GCTGGTGAAG GTCGAGACCT CCGTCTTCTA CCGCATCACC
GAGCCTGAAA AGACGGTGTA CCGGATCCGC GACGTGGATG GGGCCATCGC CACGACCGTC
GCCGGGATCG TCCGGTCCGA GATCGGCAAG CTCGAGCTTG ATCAGGTCCA GTCGAATCGG
GCGGACCTGA TCTTCAAGGT GCGCGAGCAG GTGGCCGCCA TGGTGGACGA CTGGGGCATC
GAGGTGACGC GGGCCGAGGT TCTCGATGTC AATCTCGACG ATGCGACCCG CGCCGCGATG
CTGCAGCAGC TGAACGCCGA ACGCGCGCGG CGCGCGCTCG TGACCGAGGC CGAGGGCCGC
AAGCGCGCGG TGGAACTGAA TGCCGACGCC GAACTTTATG CCGCCGAGCA GGAGGCCAAG
GCGCGTCGCG TCCTCGCCGA CGCCGAGGCC TACGCCACCG GCGTCATCGC TGTGGCCATC
CGCGAGAACG GGCTTGAGGC CGCGCAGTAT CAGGTGGCGT TGAAGCAGGT GGAGGCGCTG
ACCGCCGTGG GCAAGGGGGA TGGCAAGCAG CTTGTCGTCG TGCCGGCATC GGCGATGGAC
GCGTTCGCGG ACGCCTTCAA GATGCTCAAG GGGCGCGCAT GA
 
Protein sequence
MEPADFIGGN AVLLALAAFL ILCVFLGVRI VPQSQKHVVE RFGRLRAVLG PGINFVVPFL 
DVVAHKISIL ERQLPNAMQD AITADNVLVK VETSVFYRIT EPEKTVYRIR DVDGAIATTV
AGIVRSEIGK LELDQVQSNR ADLIFKVREQ VAAMVDDWGI EVTRAEVLDV NLDDATRAAM
LQQLNAERAR RALVTEAEGR KRAVELNADA ELYAAEQEAK ARRVLADAEA YATGVIAVAI
RENGLEAAQY QVALKQVEAL TAVGKGDGKQ LVVVPASAMD AFADAFKMLK GRA