| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2793 |
|---|
| Symbol | |
|---|
| ID | 5085146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 2838849 |
|---|
| End bp | 2839688 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640484357 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001168985 |
|---|
| Protein GI | 146278826 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGT TGCTTTCCCT CGGACATGGC TATTCGGCGC AGGCGCTTGC GCGCCGGCTT
CTTCCCGCCG GCTGGCGGGT GATCGGCACC ACGCGGAGCG CGGCCAAGGC CGATGCCCTG
CGCGCACAGG GCATCGAGCC GCTGCTCTGG CCCGGCGATC CCGGCCCGGC CCTCGCTCAG
GCCACCCACA TCCTCGCCTC GGCCGCCCCG GGCCCGGAGG GCGATCCGTT CCTCGCCACT
CACGCTTCGC GAATGGCCGA GGCCCGGCCG GAGTGGGTGG GCTACCTCTC GACCACGGGC
GTCTATGGCG ACCATCAGGG CGGCTGGGTG GATGAGGACA CCGCCCTCAC CCCCTCGACC
GAACGCGGCC GGTCCCGTGT CGCGGCCGAG CGCCAGTGGC AGGCGCTGGG TCTGCCGCTC
CACATCTTCC GGCTTGCGGG GATCTACGGC CCCGGACGCG GCCCGTTCGA GAAGGTCCGC
GACGGGACGG CGCGCCGCAT CGTGAAGCCG GGGCAGGTCT TCAGCCGCAT CCATGTCGAG
GACATCGCGC AGGTTCTGGA GGCCTCGATC CGGCATCCCG AGCCGGGCGC GATCTACAAT
GTCTGCGACG ACGATCCGGC GCCGCCCGAG GATGTGCTGG GCTATGCGGC CGAACTGATC
GGCCTGCCTC CTCCGCCCGA GGTGCCCTAT GACGAGGCCG AGATGACGCC GATGGCGCGC
AGCTTCTACG CCGAATCCAA GAGGGTGCGG AACGATCGGA TCAAGGAACG GCTGGGGGTC
CGCCTCATCC ATCCCGATTA CCGCTCGGGG CTGCGCGCCC TTCTCGTGAC GGGCGGCTGA
|
|---|
| Protein sequence | MKTLLSLGHG YSAQALARRL LPAGWRVIGT TRSAAKADAL RAQGIEPLLW PGDPGPALAQ
ATHILASAAP GPEGDPFLAT HASRMAEARP EWVGYLSTTG VYGDHQGGWV DEDTALTPST
ERGRSRVAAE RQWQALGLPL HIFRLAGIYG PGRGPFEKVR DGTARRIVKP GQVFSRIHVE
DIAQVLEASI RHPEPGAIYN VCDDDPAPPE DVLGYAAELI GLPPPPEVPY DEAEMTPMAR
SFYAESKRVR NDRIKERLGV RLIHPDYRSG LRALLVTGG
|
|---|
| |