Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2791 |
Symbol | |
ID | 5085144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 2836019 |
End bp | 2836888 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640484355 |
Product | polyprenyl synthetase |
Protein accession | YP_001168983 |
Protein GI | 146278824 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0405242 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCTTTT CCAAGGCTTT GACGGATGCG GCCGCGCGGG TGCAGGCGCG GCTTGACGCG GCGCTGGCGG ATCGCGAGGA GCTGCCGGTG GTTCATGCCA TGCGCTACGC GGTGCAGGGC GGCAAGCGGC TGCGGGGATT CCTCGTGCTC GAGTCCGCGC GCCTGCACGG GATCGTGCCC GAGGCGGCGG TAAGCGCCGC GGCGTCGATC GAGGCCCTGC ACGCCTACAG CCTCGTGCAT GACGACATGC CCTGCATGGA CGATGACGAC CTGCGCCGCG GCCTGCCGAC GGTGCACCGG AAATGGGACG AATGCACCGC TGTCCTTGCG GGCGACGCGC TGCAGACGCT GGCATTCGAG CTCTTGGCCG ATCCGGCGCT GGGCCCGGCC GAGGTGCGGA TCCGCCTTGT CGAGACGCTC GCCAAGGCCT CGGGGGCCGA GGGCATGGTG CTGGGCCAGG CGCTCGACAT TGCCGCCGAG ACGGCGGCCG TTCCCCTGAC GCTCGAACAG ATCACCCATC TGCAGGCGGG CAAGACGGGG GCGCTGATCT GCTGGTCTGC CGAAGCGGGC GCCATCCTGG GGCAGGCGGA CACGGGGCCA CTGCGCCGAT ACGCCACGGC GCTCGGGCTT GCGTTCCAGA TCGCGGACGA CATTCTCGAC GTCGAGGGCG ATGCGGACAA GGCGGGCAAG CGGCTCCAGA AGGATGCCGA GGCCGGCAAG GCCACGTTCG TGTCGCTGCT CGGGCTCGAG GGCGCCAAGG CGCGCGCGCG TGCTCTGGTG GAGGAGGCCG AGGCGGCGCT TGCCCCCTAT GGGCCAGAGG CAGGAACATT GATCGAGGCC GCGCGCTTCG TCATATCGCG TGAAAGCTGA
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Protein sequence | MSFSKALTDA AARVQARLDA ALADREELPV VHAMRYAVQG GKRLRGFLVL ESARLHGIVP EAAVSAAASI EALHAYSLVH DDMPCMDDDD LRRGLPTVHR KWDECTAVLA GDALQTLAFE LLADPALGPA EVRIRLVETL AKASGAEGMV LGQALDIAAE TAAVPLTLEQ ITHLQAGKTG ALICWSAEAG AILGQADTGP LRRYATALGL AFQIADDILD VEGDADKAGK RLQKDAEAGK ATFVSLLGLE GAKARARALV EEAEAALAPY GPEAGTLIEA ARFVISRES
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