| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2789 |
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| Symbol | |
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| ID | 5085142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 2834863 |
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| End bp | 2835786 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640484353 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001168981 |
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| Protein GI | 146278822 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.403843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTGG TCTGGATTTC GCACGCGGCC TCGGAAGGGC ATGTGACGCC CGAGGGGCAT
CCCGAGCGGA TCGAGCGCAT GGCGGCGGTG GAGGCGGCTC TCGACGGGCT GCCGCTCGAG
AGGCGCTACG CGCCGATGGC CGCCGATGCC GAGGTGCTGC GCTGCCACCC GCAAAGCCAT
CTCGACCGGA TTCGCCGTGC GGAGCCCGTC GAAGGCATCG TCGGACTGGA TCCCGACACC
TGGATGTCGC CGGGCTCGTT CGAGGCGGCG ATGCGCGCCG TCGGCGGCAC CTGTGCCGCG
GTCGATCTGG TGCTGGCGGG CGAGGCATCT TCGGCCTTCG TCGGCTGCCG CCCGCCCGGC
CACCATGCGG AACGCGAGAA GCCGATGGGC TTCTGCCTCT TTGGCAGCGT GGCCATTGCG
GCCAGGCGCG CGCTTGACCA TCACGGTCTG GGGCGGGTTG CGGTGGTGGA TTTCGACGTC
CATCACGGCA ACGGCACGCA GGACCTGCTG TGGGACGAGG GGCGGGCCCT GTTCGTCTCG
AGCCACCAGA TGCCGCTTTA TCCGGGAACG GGAGCCGCGG ACGAACGTGG CGCGCACGGG
CAGATCCTGA ACCTGCCGCT TGCCCCGGGC AGCGGGAGCG CCGAGATGCG CGAGGCCTGG
GAGGCGGCCT TCCGGCGCAT TGAGGACTGG CAGCCCGAAC TGATCCTGAT CTCGGCGGGT
TTCGACGCCC ATGCCGCCGA CCCGCTGGCC AACCTCAACT GGCGCGAGGA GGATTTCCGC
TGGCTCACCG GGCGCCTGTG CGATCTGGCT GCGGCGTCAT GCGGCGGGCG GGTGGTATCG
ACACTCGAGG GCGGATATGA TCTGGCTGCC CTCGCCGCGA GCAGCGCGGC GCATGTGGGC
GTCCTTCTGG AGCGGAGCGC ATGA
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| Protein sequence | MTVVWISHAA SEGHVTPEGH PERIERMAAV EAALDGLPLE RRYAPMAADA EVLRCHPQSH
LDRIRRAEPV EGIVGLDPDT WMSPGSFEAA MRAVGGTCAA VDLVLAGEAS SAFVGCRPPG
HHAEREKPMG FCLFGSVAIA ARRALDHHGL GRVAVVDFDV HHGNGTQDLL WDEGRALFVS
SHQMPLYPGT GAADERGAHG QILNLPLAPG SGSAEMREAW EAAFRRIEDW QPELILISAG
FDAHAADPLA NLNWREEDFR WLTGRLCDLA AASCGGRVVS TLEGGYDLAA LAASSAAHVG
VLLERSA
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