Gene Rsph17025_2788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2788 
Symbol 
ID5085141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2834050 
End bp2834748 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content69% 
IMG OID640484352 
Producttwo component transcriptional regulator 
Protein accessionYP_001168980 
Protein GI146278821 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.471427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGC CGCAGGCGCA TCTTCTGGTG GTGGACGATG ATGAGCGCAT TCGGAGCCTT 
CTGCAGAAGT TCCTGATCAG GAACGGGTTT CTCGTCTCCT CCGCCCGGGA TGCGGCGCAG
GCGCGCCGGC TGCTCGACGG GCTCGAGTTC GATCTGATCG TGCTTGACGT GATGATGCCG
GGCGAGGATG GCGTCTCGCT GACGCGCGCG CTGCGCGAGG ATCTGGCGAC ACCGATCCTG
CTGCTGACGG CGCGGGGAGA GACGTCGCAC CGGATCGAGG GGCTCGAGGC GGGGGCGGAC
GACTATCTGG CCAAGCCGTT CGAGCCGAAG GAACTGCTGC TCAGGATCAA CGCGATCCTG
CGGCGTGTGC CGTCGGCGCG GCCGGAGCTG GGGCCGAAGG TGCTGCATCT GGGGGACGTG
CGCTACGATC TGGAGCGGGG CGAGCTTTGG CGCGGCACGG AGCCGGTGCG GCTGACGGCG
ACCGAGGCGG CGCTGATGCG GATCTTTGCG GCGCAGCCCG GCGAAGCGGT GAGCCGAGAG
CGGCTGGTGG GGGACCTCGG TCGCGACGAG GGCCAGAGCC AGGAACGCGC GGTGGATGTG
CAGATCACCC GCCTCCGCCG GAAGATCGAG GTCGATCCGC GGCAGCCGCG CTATCTCCAG
ACCGTCCGCG GCTCGGGCTA CATGCTCGCG CCGGACTGA
 
Protein sequence
MSEPQAHLLV VDDDERIRSL LQKFLIRNGF LVSSARDAAQ ARRLLDGLEF DLIVLDVMMP 
GEDGVSLTRA LREDLATPIL LLTARGETSH RIEGLEAGAD DYLAKPFEPK ELLLRINAIL
RRVPSARPEL GPKVLHLGDV RYDLERGELW RGTEPVRLTA TEAALMRIFA AQPGEAVSRE
RLVGDLGRDE GQSQERAVDV QITRLRRKIE VDPRQPRYLQ TVRGSGYMLA PD