| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2778 |
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| Symbol | |
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| ID | 5085131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 2822220 |
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| End bp | 2823647 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640484342 |
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| Product | putative oxidoreductase |
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| Protein accession | YP_001168970 |
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| Protein GI | 146278811 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit
[TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.903592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAG AACCGATGCT CCAGTTCGTC AAGATGGCGA GGGAGACCCC CGAGAAACGT
CCGGCCAACC TGCGGTCGCA CGATTTCCAT GAGATCTACC GCGAGTTCGC CGCTGCCAAG
GCCGCCGAGC AAGCCAGCCG CTGCAGCCAG TGCGGTGTTC CCTTCTGCCA GTCGCACTGC
CCGCTGCACA ACAACATTCC CGACTGGCTG CGCCTGACCG CCACGGGCCG GCTTCAGGAA
GCCTACGAGA TCAGCCAGGC CACCAACACC TTCCCCGAGA TCTGCGGCCG CATCTGCCCG
CAGGACCGTC TGTGCGAGGG CAACTGCGTG ATCGAGCAGT CGGGCCACGG CACGGTGACC
ATCGGCGCGG TCGAGAAATA CATCACGGAC ATGGCCTGGG AGAACGGCTG GGTGACGCCC
GGCCGCCCCA TGCACGAGCG GTCGGAATCG GTGGGCATCA TCGGGGCAGG GCCGGGGGGG
CTTGCCGCCG CCGATGCGCT GCGCCGCGCC GGGCTTCAGG TCACGGTCTA TGACCGCTAC
GACCGGGCCG GCGGCCTGCT GACCTACGGC ATTCCCGGCT TCAAGCTGGA GAAGGACGTG
GTCATGCGCC GCGTCGAGCA GCTCGAGCAG GCGGGCGTGC AATTCGTGCT CAACTGCAAT
GTGGGCGAGG ATCTCAGCTT CGACGCGATC CGGGGCCAGC ATGACGCGGT GCTGATCGCG
ACGGGCGTGT ACAAGCAGCG CGACCTTGCG GCGCCGGGCG TGGGCTCGGC GGGCGTGGTG
CAGGCGCTCG ACTATCTGAC CCTGTCCAAT CGGCGCAGCT TCGGCGACGA GGTCGATGCC
GACGGGCTTG ATGCCAGCGG CAAGCGCGTC GTGGTGATCG GCGGCGGCGA CACGGCGATG
GACTGCGTGC GCACCGCCAT CCGTCAGGGC GCCACCAGCG TGAAGTGCCT CTATCGCCGC
GACCGGGCCA ACATGCCGGG CTCGCAGCGC GAGGTCGCCA ACGCCGAGGA GGAAGGTGTC
GAGTTCGTCT GGCTCGCGGC GCCGCGCGGT TTCATTGCGG GCGACGCGGT CGAGGGCGTG
ATCGTGCAGA AGATGCGGCT TGGCGAGCCC GACGCATCCG GCCGGCAGAT GCCCGAGGTG
ATCGAAGGCG CCGACTATGT CGAGCCGGCC GATCTCGCCA TCATGGCGCT GGGCTTCGAG
CCCGAGGATC TGCCGACCCT CTGGGGTGTG CCCGAACTGG CCGTGACGCG CTGGGGCACG
ATCAAGGCCG ACTTCCGCAC CCATGCGACC AGCCTGCCCG GCGTTTATGC CGTGGGCGAC
ATCGTGCGGG GCGCGAGCCT CGTCGTCTGG GCCATCCGCG ACGGCCGCGA AGCGGCGGAC
GCGATCCTCG ACTATCTGGC GCAACCGGCC ATCGCCGCGG CCGAATAG
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| Protein sequence | MAKEPMLQFV KMARETPEKR PANLRSHDFH EIYREFAAAK AAEQASRCSQ CGVPFCQSHC
PLHNNIPDWL RLTATGRLQE AYEISQATNT FPEICGRICP QDRLCEGNCV IEQSGHGTVT
IGAVEKYITD MAWENGWVTP GRPMHERSES VGIIGAGPGG LAAADALRRA GLQVTVYDRY
DRAGGLLTYG IPGFKLEKDV VMRRVEQLEQ AGVQFVLNCN VGEDLSFDAI RGQHDAVLIA
TGVYKQRDLA APGVGSAGVV QALDYLTLSN RRSFGDEVDA DGLDASGKRV VVIGGGDTAM
DCVRTAIRQG ATSVKCLYRR DRANMPGSQR EVANAEEEGV EFVWLAAPRG FIAGDAVEGV
IVQKMRLGEP DASGRQMPEV IEGADYVEPA DLAIMALGFE PEDLPTLWGV PELAVTRWGT
IKADFRTHAT SLPGVYAVGD IVRGASLVVW AIRDGREAAD AILDYLAQPA IAAAE
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