| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2761 |
|---|
| Symbol | |
|---|
| ID | 5085114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 2803874 |
|---|
| End bp | 2806594 |
|---|
| Gene Length | 2721 bp |
|---|
| Protein Length | 906 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640484324 |
|---|
| Product | preprotein translocase subunit SecA |
|---|
| Protein accession | YP_001168953 |
|---|
| Protein GI | 146278794 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
|---|
| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGGTC TCGGAACGCT CGCGCGCAAG ATCTTCGGAA CGCCCAACGA CCGCAAGGTG
AAGTCCGTCC GCAGCCTCGT GGCTCGCATC AACGAACTTG AGACGGAATT TCAGGCGCTC
TCGGACGAGG GCATCAAGCA GAAGACCGCC GAATTCCAGC GACGGGTGCA GGAAGGCGGA
GAGAGCCTCG ACGATCTTCT GCCCGAAGCC TTCGCCAACT GCCGCGAGGG CGCGCGCCGC
GCCCTTGGCC TCCGGGCCTT CGACGTTCAG CTGATGGGCG GGATCTTCCT GCATCAGGGC
AACATCGCCG AGATGAAGAC GGGCGAGGGC AAGACGCTGG TCGCCACCTT CCCCGCCTAC
CTGAACGCGC TCGCCGGCAA GGGCGTGCAT GTCGTGACGG TGAACGACTA CCTCGCCAAG
CGCGACTCCG AATGGATGGG CAAGGTCTAT GCCCAGCTCG GCCTGACGAC GGGCGTGGTC
TATCCCTTCC AGTCCGAGGA AGAGAAGAAG GCCGCCTATC GCGCCGACAT CACCTATGCG
ACGAACAACG AACTCGGCTT CGACTATCTC CGCGACAACA TGAAGGCGTC GAAGGAAGAG
ATGAAGCAGC GCGGCCATTT CTTCGCCATC GTGGACGAGG TCGACTCGAT CCTGATCGAC
GAGGCCCGGA CGCCGCTCAT CATCTCGGGG CCCAGCCAGG ACCGCAGCGA TCTCTACACC
AAGGTGGACA AGCTGATCCC GGAACTCGTC GAGGAGCACT ACAAGCTCGA CGAGAAGACG
CGGAACGTGA CCTTCACCGA GGAGGGCAAC GAGTTCCTGG AAACGCGGCT GCACGAGACC
GGCCTGCTGC CCGAGGGTCA GTCGCTCTAT GACCCGGAAA GCACGACCAT CGTGCACCAC
GTCAACCAGG GCCTGCGCGC CCACAAGCTC TTCCACCGCG ACCAGCAATA TATCGTTCGC
AACGACGAGA TCATGCTGAT CGACGAATTC ACCGGCCGCA TGATGCGCGG CCGCCGCCTG
TCGGACGGTC TGCATCAGGC GATCGAGGCC AAGGAGGGCG TCTCGATCCA GCCCGAGAAC
GTGACTCTCG CCTCGGTCAC CTTCCAGAAC TACTTCCGCC TCTACGACAA GCTGGGCGGC
ATGACCGGCA CCGCGGCCAC CGAGGCCGAG GAGTTCATGG AGATCTACGG CCTCGGCGTG
GTCGAGGTGC CGACGAACCG CCCCGTGGCC CGGACCGATG AACACGACGC CGTCTATCGC
ACCGCCCGCG AGAAGAACGA CGGGATCGTC GCCTCGATCA AGGAGGCGCA CGAGCGCGGA
CAGCCGATCC TCGTGGGCAC CACCTCGATC GACAAGTCCG AGGCCCTGTC CGAACTGCTG
AAGGCCGCGG GCATCCCGCA CAACGTCCTC AACGCGCGCC AGCACGAGCA GGAGGCGCAG
ATCGTGGCCG ACGCGGGCAA GCCGGGCGCC GTGACCATCG CCACCAACAT GGCCGGCCGC
GGCACCGACA TCCAGCTCGG CGGCAACGTC GAGATGAAGG TGATGCAGGC GCTGGCCGCC
GATCCGACCG CGCACCCCGA CGAGATCCGG GCCCGGATCG AAGCGGAACA TGCCGAAGAA
AAGCAGAAGG TCATCGACGC GGGCGGCCTG TTCGTGCTCG GCACCGAGCG CCACGAGTCG
CGCCGGATCG ACAACCAGCT CCGCGGCCGC TCGGGCCGTC AGGGCGACCC GGGCCGCTCG
GCTTTCTTCC TCAGTCTCGA AGACGACCTG ATGCGGATCT TCGGCTCGGA CCGGCTCGAC
AAGGTGCTGT CCACGCTCGG CATGAAGGAC GGCGAGGCGA TCGTCCATCC GTGGGTGAAC
AAGTCGCTCG AGAAGGCTCA GGCCAAGGTC GAGGCCCGCA ACTTCGACAT CCGCAAGCAG
CTGCTGAAGT TCGACGACGT GATGAACGAC CAGCGCAAGG CGATCTTCAG CCAGCGCCTC
GAGATCATGG AGGCCGAGGA TCTGTCGGAC ATCGCGCAGG ACATGCGCTA TCAGGTGATT
GATGACCTGA TCGACATGCA CATGCCGCCG AAGAGCTACT CGGACCAGTG GGACATCGAG
GGCATGCACC GGGCGGTGAT GGACAAGCTG GGCCTCGATG CGCCGCTCGC GAAATGGGCG
CAGGAGGAAG GTGTCGATCA GGATGTGGTG CGCGAGCGGC TGTGCGAAGC GGCCGACCGG
CAGATCGCCG ACAAGACCGC CGCCTTCGGC CCCGAGACCA TGCGGTCGAT CGAAAAGCAG
ATCCTTCTGC AGGCCATCGA TGCGAAATGG CGCGAGCATC TTCTGACGCT CGAGCATCTG
CGCTCGGTGG TGGGCTTCCG CGGCTATGCC CAGCGGGATC CGCTGTCGGA ATACAAGACC
GAGGCCTTTG CGCTGTTCGA ATCGATGCTG AACTCGCTGC GGCAGGATGT GACGCAGAAG
CTGGCTCAGG TGCGCCCGCT GTCCGAAGAG GAGCAGCAGG CCGTGATGCG CCAGTTCCTC
GATCAGCAGC GCACGGCGGC CGAAGCTCCT GCATCGGTGC CGCAACCGCA GGCCGCCGTG
GCGCCGCAGC CCGCCCCGGA ACTCGTCGGC GCCGACAACG GCGAATCGCA GCCCCAGGCT
TGGGGCGACG TCGCCCGGAA CGATCCGTGC CCGTGCGGCT CGGGCCTCAA GTACAAGCAC
TGCCACGGCC GCCTCGACTG A
|
|---|
| Protein sequence | MLGLGTLARK IFGTPNDRKV KSVRSLVARI NELETEFQAL SDEGIKQKTA EFQRRVQEGG
ESLDDLLPEA FANCREGARR ALGLRAFDVQ LMGGIFLHQG NIAEMKTGEG KTLVATFPAY
LNALAGKGVH VVTVNDYLAK RDSEWMGKVY AQLGLTTGVV YPFQSEEEKK AAYRADITYA
TNNELGFDYL RDNMKASKEE MKQRGHFFAI VDEVDSILID EARTPLIISG PSQDRSDLYT
KVDKLIPELV EEHYKLDEKT RNVTFTEEGN EFLETRLHET GLLPEGQSLY DPESTTIVHH
VNQGLRAHKL FHRDQQYIVR NDEIMLIDEF TGRMMRGRRL SDGLHQAIEA KEGVSIQPEN
VTLASVTFQN YFRLYDKLGG MTGTAATEAE EFMEIYGLGV VEVPTNRPVA RTDEHDAVYR
TAREKNDGIV ASIKEAHERG QPILVGTTSI DKSEALSELL KAAGIPHNVL NARQHEQEAQ
IVADAGKPGA VTIATNMAGR GTDIQLGGNV EMKVMQALAA DPTAHPDEIR ARIEAEHAEE
KQKVIDAGGL FVLGTERHES RRIDNQLRGR SGRQGDPGRS AFFLSLEDDL MRIFGSDRLD
KVLSTLGMKD GEAIVHPWVN KSLEKAQAKV EARNFDIRKQ LLKFDDVMND QRKAIFSQRL
EIMEAEDLSD IAQDMRYQVI DDLIDMHMPP KSYSDQWDIE GMHRAVMDKL GLDAPLAKWA
QEEGVDQDVV RERLCEAADR QIADKTAAFG PETMRSIEKQ ILLQAIDAKW REHLLTLEHL
RSVVGFRGYA QRDPLSEYKT EAFALFESML NSLRQDVTQK LAQVRPLSEE EQQAVMRQFL
DQQRTAAEAP ASVPQPQAAV APQPAPELVG ADNGESQPQA WGDVARNDPC PCGSGLKYKH
CHGRLD
|
|---|
| |