Gene Rsph17025_2752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2752 
Symbol 
ID5085255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2793376 
End bp2794185 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content70% 
IMG OID640484315 
Product3-deoxy-manno-octulosonate cytidylyltransferase 
Protein accessionYP_001168944 
Protein GI146278785 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase 
TIGRFAM ID[TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.99379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTCC TGATCGTGAT CCCCGCCCGC TACGCCTCGA CCCGCTACCC CGGCAAGCCG 
CTCGTCGCCC TGCGCGACCC GGACGGCACC GAAAAGACCC TCATCCAGCG CAGCTGGGAG
GCCGCGATGG CCGTCCGCGG CATCGCGCGC GTGGTCGTGG CCACCGACGA TGCGCGGATC
CGGGACGCGG CCGAGGGATT TGGCGCCGAA GTGGTGATGA CCTCATCGGA TTGCCGGAAC
GGCACTGAAC GGTGTGCCGA GGTGGCCGCG GCGCTGCCCG GCTCCGAGAT CGTGGTGAAC
CTGCAGGGCG ATGCGCCGCT GACCCCGCCC TGGTTCATCG AGGACCTGAT CGAAGGGCTG
CGCGCCGATC CTTCGGCCGA GGTGGCCACG CCCGTCCTGC GCTGCGACGG GCGGGCGCTG
AACAGCTTTC TCGCCGACCG CCGCGCCGGG CGGGTGGGCG GCACGACGGC CGTCTTCGGG
GTGACGCACC ACGCGCTCTT CTTCTCCAAG GAAGTGATTC CCTATACCGG CCGTCCCTAT
GCCGACGCCG AAGCGACGCC GGTCTTCCAT CATGTCGGCG TCTATGCCTA TCGCCCCTCG
GCGCTGGCGC TCTATCCGGA CTGGCCCACA GGCCCTCTCG AAGAGCTGGA GGGGCTGGAG
CAGCTCCGCT TCCTCGAGAA CGGCCGCCGG GTGCTCTGCG TCGAGGTCGA GGCGCGCGGC
CGGCAGTTCT GGGAGTTGAA CAATCCCGAG GACGTGGCCC GGATCGAGGC CATGCTGGCC
GAGATGCAGG CTGGACGAGA CCCAGCCTGA
 
Protein sequence
MSVLIVIPAR YASTRYPGKP LVALRDPDGT EKTLIQRSWE AAMAVRGIAR VVVATDDARI 
RDAAEGFGAE VVMTSSDCRN GTERCAEVAA ALPGSEIVVN LQGDAPLTPP WFIEDLIEGL
RADPSAEVAT PVLRCDGRAL NSFLADRRAG RVGGTTAVFG VTHHALFFSK EVIPYTGRPY
ADAEATPVFH HVGVYAYRPS ALALYPDWPT GPLEELEGLE QLRFLENGRR VLCVEVEARG
RQFWELNNPE DVARIEAMLA EMQAGRDPA