| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2745 |
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| Symbol | fliF |
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| ID | 5085248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 2785960 |
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| End bp | 2787591 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640484308 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001168937 |
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| Protein GI | 146278778 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCGGC GAGGCAGAAG CCCCAAGTCG GAGACCGAAG TGCAGAATCT GATTTCCATC
TGGAACGATC TTGACGGGCG CCGCCGCGCC ATCGTCGTCG GGGCGACGGC GGCTATGTTC
CTTGCCATAT TCGGCCTGTC GCAGTTCGCG AACAAGCCGC GCATGGCCCT TCTCTATGCG
GGCCTGCAGG GTGCGGTTGC GGGCGAGGTC GTCGCGGCTC TCGAAGCGCA GGGCGTGGCA
TATGAGGTGC AGGGCGATTC GATCCACGTC GATGCGAGCC GGCGGGATGA GCTGCGAATG
AAGCTGGCGG GTGAAGGTCT CCCTGCCACG GGCACGGCGG GGTACGAACT GCTCGACGGA
CTGTCCGGCT TCGGAACAAC GTCGCAGATG TTCGATGCCG CCTATCTGCG CGCGAAGGAA
GGAGAGCTTG CCCGGACGAT CCTTGCCAGT CCGCAGGTCA AGGCGGCGCG CGTGCATATC
GCACCAGCCG CCGCGCAACT CTTTCAGCGC GAGCGCAGGC CCACGGCCAG CGTCACGGTG
ACGACATCGG GCGGAAACCT CACCATGGAA CAGGCACGGG CCTTCAAGCA CCTGATCGCC
TCCGCCGTGG CGGGAATGCA GCCTGAGGAT GTCTCGGTTA TTGACACGGT TGGCGGACTC
ATCCGGGCGG GTGACACCGG AGACGGCATC GCGGGCACAG CCGGCACCCG CGCAGCAGAA
CTGCGCCGCA ACGTGGAGCG CCTGCTCGAG GCGCGGGTCG GGCCGGGCCG TGCGGTCGTC
GAAGTCAGCT TGGATGTCGA GACCGCGAGC GAGACGATCG TGGAGAAGAC CTTCGATCCG
AAGGGGCGCG TGCCGATCTC ATCGGAATTG CAGGAAAAGA CCAGTTCGTC CACACAGCCC
GCGCCCGACG TGACGGTGGC CTCGAACTTG CCGGAAGGCG ATGCCGCTGG CGGCTCTGCC
GGCAAGTCGA ACTCGAGCGA GACGCGCGAG ACAACCAACT TTGAGGTGTC GCAGACGCAG
CGCGAGCTTG TGCGCCAGCC CGGCACGGTC CGGCGCCTCA CGGTCGCCGT GCTGGTCGAT
GGCGTCCGAA TGGCCGGGGA GGATGGACAG CTGACCTGGC AACCTCGGCC GGAAGAGGAA
CTGGCGGTGC TTCGCGAACT GGTCGGCGCG GCCGTCGGGC TGGACGAATC GCGCGGAGAC
AGGCTGACCC TGCGATCGCT GATCTTCGAG ACGCCGCCGG ACCTCGGCAC ACTGGCAGAG
GCCGGTATGC TGGGACGCCT GGGCAGCTTC GACCTGATGA GCCTGATCCA GATAGCGGTT
CTGGCACTCG TGGCGCTGGT TCTGGGCCTG TTCGTCGTGC GGCCGGTGCT GACCGCGCGG
CGCGATCCGG CGCTGTCGTC AGCGACGCCG CCGCTCGCCC TGCCCGGCTA CGGCGGCACC
AACGAGGCGC TGACGGGGGA AATCGACGAC AGCACTGATC TGCCCGATTT CCCGATGGTG
GCCTCGGCTC CGCTGGATTT CGACGACGAA CCCGATCCCG TCGCGCGCTT GCGCCGACTG
ATCGAGGAAC GGCAGGCCGA GTCGGTTGAA ATCCTGCGAG GCTGGATGGA ACCGCAGCGT
GAGGCGCCGT GA
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| Protein sequence | MVRRGRSPKS ETEVQNLISI WNDLDGRRRA IVVGATAAMF LAIFGLSQFA NKPRMALLYA
GLQGAVAGEV VAALEAQGVA YEVQGDSIHV DASRRDELRM KLAGEGLPAT GTAGYELLDG
LSGFGTTSQM FDAAYLRAKE GELARTILAS PQVKAARVHI APAAAQLFQR ERRPTASVTV
TTSGGNLTME QARAFKHLIA SAVAGMQPED VSVIDTVGGL IRAGDTGDGI AGTAGTRAAE
LRRNVERLLE ARVGPGRAVV EVSLDVETAS ETIVEKTFDP KGRVPISSEL QEKTSSSTQP
APDVTVASNL PEGDAAGGSA GKSNSSETRE TTNFEVSQTQ RELVRQPGTV RRLTVAVLVD
GVRMAGEDGQ LTWQPRPEEE LAVLRELVGA AVGLDESRGD RLTLRSLIFE TPPDLGTLAE
AGMLGRLGSF DLMSLIQIAV LALVALVLGL FVVRPVLTAR RDPALSSATP PLALPGYGGT
NEALTGEIDD STDLPDFPMV ASAPLDFDDE PDPVARLRRL IEERQAESVE ILRGWMEPQR
EAP
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