| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2740 |
|---|
| Symbol | |
|---|
| ID | 5085243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 2780405 |
|---|
| End bp | 2783236 |
|---|
| Gene Length | 2832 bp |
|---|
| Protein Length | 943 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640484303 |
|---|
| Product | PAS/PAC sensor hybrid histidine kinase |
|---|
| Protein accession | YP_001168932 |
|---|
| Protein GI | 146278773 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGTCG CACTTGACAA GATTTTTGCC GAAGATCCAT CACCCTACGT TCTTCTGAAA
CGCGATTTGA CAATGATCTG GGCGAATACC GCCTACCTGC GTGCAACCGG GCGCACGCGC
GAGGACATTA TCGGCAAGTG CATGACCGAC GTCTTTCCCG CCGACCCGGA TTCCATCCCT
GACCAGATGC TCCGCGGCTC CTTTCGCAGG GTGATCGAAC TGGGGCGCCC CGACCATCTG
CCGCTCATCC CCTACCCGAT CACAAGCGGC GACGGCCGGA AGGAGGACCG GTTCTGGAGC
GCGACGAACA CACCGATCAA GGATGCAGAC GGGCAGGTGG AGTTCATCCT GCAGAACACC
AACGACATCA CGGCGCTTTA TCGTGAGGAC GGGGTCGGCG CGCAGCCTTC GGATCAGGCG
CGGATGATCC GGCGCGCCGA GGCGGTGACG CGCGAGAACC TCGAACTCGG CAGCGCGATC
GATTTCTTCC GCAGCGCGTT CGACCAGGCG CCGAGCTTCA TGGTCGTGCT TGAGGGCCGG
GATCATGTCT TCCGCATCGT GAACCAGGCG TACCTGCAAC TCGTGGGGCG TCGCGACCTG
GTGCATCGCA CGGTGCGCGA GGCGCTGCCG GAACTCGACG GACAGGGGTT CTTCGAGCTT
CTGGACGATG TGTTGCTGAC CGGCCGGGCG TTCACCCGCC GCGCCGCGCC TGTCCTGCTG
CGCAACGGCG CCGAGATGGA CCGCAGATAC GTCGATTTCA TCATGTGTCC ACTGCGGGGC
CCGGATGGGG ATGTGCGCGG CGTCTTCGTC GAGGGCCATG ACGTCACGGG CCAGAAGCTG
GCCGAAGCCG AGGTGATCGA GACGCGCGAG CGGTTCCGGC TGATGGCGCA GACGATGCCC
AACCACGTCT GGACAGCGAG GACCGATGGC AGGCTCGACT GGATCAACGA TCGGTTGCGC
GACTACTGCG GTCTGCCGGC CGAGGACCTG GTGGGAGCGG CGCCCATGTC CATCCTTCGC
CCCGAGGACA GGGAGCGCGC ACAGGAAGCC TGGTCGAACT CGCTGACGCA GGGCGTTCCC
TTCGAGCAGG AGGTCCGCAT CCGGCGACAT GACGGCGCCG ACCGATGGCA CCTCTCGCGG
GCCTTGCCGA TCCGCGACGA CCAGGGCCAC ATCCTGCGGT GGATCGGCAC GAACACGGAT
ATCGAGGATC GCAAGCTTGC CGAGGAAGCG ATCGCCGGGC TGAACGCCAC CCTTGAGGAG
CGGGTTGAGC AGCGCAACCG TGAGCTGGAG GAACTGAGCA ACACGCTGCG GCAGAGCCAG
AAGATGGAGG CCATCGGAAA TCTCGCAGGT GGAATTGCTC ATGACTTCAA CAATTTGCTT
CAGACCATCA CGGGCAGCGT GCAGCTGGCT CTGCGATCGC TGGACGAAGG ACATACGGCA
CGCCCCCGCC TCGACCAGGC CCTGAGCGCC GTCGGGCGCG GTGCAACTCT GGCGTCACAA
TTGCTGGCCT TCGGCCGCCG GCAGCCCCTG GCGCCCCGCG TGATCAATCT CGGCCGGCTC
CTGCGGGACG CCGACCATAT CGTCCGCAGT GCCGTGGGCG AGGGCATCGA GGTCGAGACG
ATTGTGGCGG GCGGGCTGTG GAACACCTGC GTGGATCCGG CGAATGTCGA GACGGCTCTT
CTCAACCTGG CGATCAATGC GCGCGACGCC ATGGACGGCC GCGGGCACCT CACGATTGAA
ATCGGCAACT CCTGGCTGGA CGATGCCTAC ACCAAGGGGA TCCAGGATCT GGCACCGGGC
CAGTATGTCA TGCTGGCCGT AACCGACACC GGCTGCGGCA TGGCCCCCGA CATCATCGAG
CGCGTGTTTG AACCTTTTTT CACCACAAAG GCGGAAGGGC GCGGCACGGG TTTGGGGATG
TCCATGGTCT ATGGATTCGT CAAACAGTCG GGCGGACACA TCAAGATCTA CAGCGAGGTC
GGCAACGGCA CATCGATCAA GATCTACCTG CCCCGCTCCC TCGAGGCCGA AGATGCTGCG
CGGCCTCCGG CGATCGGTCC CATGACCGGT GGCGACGAGA CGATTCTGCT GGTCGAGGAT
GACGAGCAGG TGCGCCTCAC CGCAGCGGGT CTTCTGCATG ATCTGGGCTA TGCGGTCCTG
CAGGCCCGGG ATGCCGATCG TGCGCTGACG ATCGTCGAAA GCGGCGCCCG CATCGATCTG
CTCTTCACCG ATGTCGTCAT GCCCGGGCAG CTGAACAGCC GGCAGCTGGC AGAGAAGGCC
CGGATGCTGA GGCCCGGTCT GCCGGTCCTC TTCACCTCGG GTTACACGCA GAATTCCATC
GTGCACGGGG GCCGACTTGA CAGCGGCGTG CACCTGCTCA GCAAGCCCTA CACGCAGGAG
GCCCTGGCAC GGAAGATCCG CGAAGTGCTT TCGACGGGCG GTTCACCGAG CGCGCCGCCG
GCACCCGCGC GCCATGTGCT TGTGTGCGAG GACGATGTCA TCATCCGCAT GAACCTCGCC
GAGACGCTGG CGGAGGCCGG CTACCGGGTT ACTCAGGCAG GGGCAGGTGG TGCCGCGCTC
CTGCAGATCA GGCAGGAAGC CCCGGACATG CTGCTGGTGG ATCTTGGCCT GCCTGACATG
AGCGGCCTCG AACTGGCCCG GACGGCCCGG ACCATCCGCC CGGATCTGCC GATCCTGTTC
GCGACGGGCG ACAGCCAGAT CCCCGATCTC GAGTTCAGGC CGCACGCCGA CGTGCTGATC
AAGCCGTTCG GAGACGAGGC GATGCTCGAA TGCGTGGCGC GACTCCTGGC CGGTGAGGTC
ATTTCACGAT GA
|
|---|
| Protein sequence | MLVALDKIFA EDPSPYVLLK RDLTMIWANT AYLRATGRTR EDIIGKCMTD VFPADPDSIP
DQMLRGSFRR VIELGRPDHL PLIPYPITSG DGRKEDRFWS ATNTPIKDAD GQVEFILQNT
NDITALYRED GVGAQPSDQA RMIRRAEAVT RENLELGSAI DFFRSAFDQA PSFMVVLEGR
DHVFRIVNQA YLQLVGRRDL VHRTVREALP ELDGQGFFEL LDDVLLTGRA FTRRAAPVLL
RNGAEMDRRY VDFIMCPLRG PDGDVRGVFV EGHDVTGQKL AEAEVIETRE RFRLMAQTMP
NHVWTARTDG RLDWINDRLR DYCGLPAEDL VGAAPMSILR PEDRERAQEA WSNSLTQGVP
FEQEVRIRRH DGADRWHLSR ALPIRDDQGH ILRWIGTNTD IEDRKLAEEA IAGLNATLEE
RVEQRNRELE ELSNTLRQSQ KMEAIGNLAG GIAHDFNNLL QTITGSVQLA LRSLDEGHTA
RPRLDQALSA VGRGATLASQ LLAFGRRQPL APRVINLGRL LRDADHIVRS AVGEGIEVET
IVAGGLWNTC VDPANVETAL LNLAINARDA MDGRGHLTIE IGNSWLDDAY TKGIQDLAPG
QYVMLAVTDT GCGMAPDIIE RVFEPFFTTK AEGRGTGLGM SMVYGFVKQS GGHIKIYSEV
GNGTSIKIYL PRSLEAEDAA RPPAIGPMTG GDETILLVED DEQVRLTAAG LLHDLGYAVL
QARDADRALT IVESGARIDL LFTDVVMPGQ LNSRQLAEKA RMLRPGLPVL FTSGYTQNSI
VHGGRLDSGV HLLSKPYTQE ALARKIREVL STGGSPSAPP APARHVLVCE DDVIIRMNLA
ETLAEAGYRV TQAGAGGAAL LQIRQEAPDM LLVDLGLPDM SGLELARTAR TIRPDLPILF
ATGDSQIPDL EFRPHADVLI KPFGDEAMLE CVARLLAGEV ISR
|
|---|
| |