Gene Rsph17025_2721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2721 
Symbol 
ID5085224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2756960 
End bp2758240 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content68% 
IMG OID640484284 
ProductABC-type branched-chain amino acid transport systems periplasmic component-like protein 
Protein accessionYP_001168913 
Protein GI146278754 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.368062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGCG AGACGATCCT TCATCCCACC CGCCGCTCGC TGCTTGCCGG CGGTGCCGCC 
GCGCTGACGG CCGCAGCCCT GCCGCGCTAC GCGCAGGCGC AAAGCTCCGA GCCGATCCGG
CTGGGCTTCC AGCTTCACCG CACGGGGATC GGCGCGGCCT ACGGGCGCTG GTACGAGCGG
ACGGCGCTGG CCGCGCTCAA GGTCGTGAAC GAGGCGGGCG GGATCGCCGG GCGCCCGGTC
GAGATCCTGT TCGAGGATGA CGCAACCGAC CCCCGCCGCG GCGCCGAGGT GGTGGAAAAG
CTTGCCACGC AGGCCAGGGT GGACCTGATC TTCGGGCCGC TCTTCAGCCA TGTCGTGATC
GGCTCGGCCC CGCGCGCGGG CGAGCTGAAG ATCCCCTATC TCGTCTGCTC CGAGGGCTAC
CATGTCGCCT CGGGCAAGCT GAACCGCTGG ACGCTGCAGC CCGGAATTAC CGACGTGCGG
GCGCAGGTGA CGGCGATGGC GCCGTGGGTC ACATCGACCC TCGGCAAGAA GGTCACGATG
ATCTTCCCCG ACTACGCCTT CGGCCACGAC CACCGCGACT TCTTCACCGA AGCCGTGGCG
GCGCAGGGCG GCGAGGTGAT CGCAAAGATC GCCATCCCGC CGACCGAGAC CAGCTTCACC
CGCTACTTCC CGCGCATCCC GCGCGACACC GAGGTGCTCT ACCACGTCAT GGTCGGGCCG
GCCGTGCTGA CCTTCGTCAA GGAACTGGGC GAGTTCTACG GATCGGGCGC GAAACCCGAG
ATCTTCGGCT TCATCGACTC GCTCGAGGCT GTGGACATCG CGAGCCCCGG GCTCGAGTTC
CTCGAGGGCT CGCACTTCTG GGAGGGCCAG TGCCGGATGC TGCAGCCCGA CGCCTCCGAG
GCCGAGACCT TCTACCGCGA CGCGGTGGGC GTGGACGCCA ATGGCGCGGC GATCGAGGAT
CCGAAGAATG TCTCGTGCTA CGGGCACATG TTCTCGGTCT GGGAAACGCT CTTCGCCATC
AAGGAGGGCA TGGAGGCCTG CGGCTGGCGC GGCCCGCAGG ACCGGCAGGC CTTTGTCGAG
GCGGTTGAGG CCTTCACCGA CATGCCCGCC GGGCGCGAGC GGCCGCAGGG CGCCAAGGTC
TTCAACGCGA AGCTGCATCA GGCCTTCGGG CACCAGTTCA TCACGAAGCT CGAGGGCGGC
AAGCTCGTGA AGGTGCACGA GACCTCGATC GAGGACAGCC TCTACGAGAG CGACGTGGAC
TACACCGCCA TGTCCTTCTG A
 
Protein sequence
MTRETILHPT RRSLLAGGAA ALTAAALPRY AQAQSSEPIR LGFQLHRTGI GAAYGRWYER 
TALAALKVVN EAGGIAGRPV EILFEDDATD PRRGAEVVEK LATQARVDLI FGPLFSHVVI
GSAPRAGELK IPYLVCSEGY HVASGKLNRW TLQPGITDVR AQVTAMAPWV TSTLGKKVTM
IFPDYAFGHD HRDFFTEAVA AQGGEVIAKI AIPPTETSFT RYFPRIPRDT EVLYHVMVGP
AVLTFVKELG EFYGSGAKPE IFGFIDSLEA VDIASPGLEF LEGSHFWEGQ CRMLQPDASE
AETFYRDAVG VDANGAAIED PKNVSCYGHM FSVWETLFAI KEGMEACGWR GPQDRQAFVE
AVEAFTDMPA GRERPQGAKV FNAKLHQAFG HQFITKLEGG KLVKVHETSI EDSLYESDVD
YTAMSF