Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2721 |
Symbol | |
ID | 5085224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2756960 |
End bp | 2758240 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640484284 |
Product | ABC-type branched-chain amino acid transport systems periplasmic component-like protein |
Protein accession | YP_001168913 |
Protein GI | 146278754 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.368062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCGCG AGACGATCCT TCATCCCACC CGCCGCTCGC TGCTTGCCGG CGGTGCCGCC GCGCTGACGG CCGCAGCCCT GCCGCGCTAC GCGCAGGCGC AAAGCTCCGA GCCGATCCGG CTGGGCTTCC AGCTTCACCG CACGGGGATC GGCGCGGCCT ACGGGCGCTG GTACGAGCGG ACGGCGCTGG CCGCGCTCAA GGTCGTGAAC GAGGCGGGCG GGATCGCCGG GCGCCCGGTC GAGATCCTGT TCGAGGATGA CGCAACCGAC CCCCGCCGCG GCGCCGAGGT GGTGGAAAAG CTTGCCACGC AGGCCAGGGT GGACCTGATC TTCGGGCCGC TCTTCAGCCA TGTCGTGATC GGCTCGGCCC CGCGCGCGGG CGAGCTGAAG ATCCCCTATC TCGTCTGCTC CGAGGGCTAC CATGTCGCCT CGGGCAAGCT GAACCGCTGG ACGCTGCAGC CCGGAATTAC CGACGTGCGG GCGCAGGTGA CGGCGATGGC GCCGTGGGTC ACATCGACCC TCGGCAAGAA GGTCACGATG ATCTTCCCCG ACTACGCCTT CGGCCACGAC CACCGCGACT TCTTCACCGA AGCCGTGGCG GCGCAGGGCG GCGAGGTGAT CGCAAAGATC GCCATCCCGC CGACCGAGAC CAGCTTCACC CGCTACTTCC CGCGCATCCC GCGCGACACC GAGGTGCTCT ACCACGTCAT GGTCGGGCCG GCCGTGCTGA CCTTCGTCAA GGAACTGGGC GAGTTCTACG GATCGGGCGC GAAACCCGAG ATCTTCGGCT TCATCGACTC GCTCGAGGCT GTGGACATCG CGAGCCCCGG GCTCGAGTTC CTCGAGGGCT CGCACTTCTG GGAGGGCCAG TGCCGGATGC TGCAGCCCGA CGCCTCCGAG GCCGAGACCT TCTACCGCGA CGCGGTGGGC GTGGACGCCA ATGGCGCGGC GATCGAGGAT CCGAAGAATG TCTCGTGCTA CGGGCACATG TTCTCGGTCT GGGAAACGCT CTTCGCCATC AAGGAGGGCA TGGAGGCCTG CGGCTGGCGC GGCCCGCAGG ACCGGCAGGC CTTTGTCGAG GCGGTTGAGG CCTTCACCGA CATGCCCGCC GGGCGCGAGC GGCCGCAGGG CGCCAAGGTC TTCAACGCGA AGCTGCATCA GGCCTTCGGG CACCAGTTCA TCACGAAGCT CGAGGGCGGC AAGCTCGTGA AGGTGCACGA GACCTCGATC GAGGACAGCC TCTACGAGAG CGACGTGGAC TACACCGCCA TGTCCTTCTG A
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Protein sequence | MTRETILHPT RRSLLAGGAA ALTAAALPRY AQAQSSEPIR LGFQLHRTGI GAAYGRWYER TALAALKVVN EAGGIAGRPV EILFEDDATD PRRGAEVVEK LATQARVDLI FGPLFSHVVI GSAPRAGELK IPYLVCSEGY HVASGKLNRW TLQPGITDVR AQVTAMAPWV TSTLGKKVTM IFPDYAFGHD HRDFFTEAVA AQGGEVIAKI AIPPTETSFT RYFPRIPRDT EVLYHVMVGP AVLTFVKELG EFYGSGAKPE IFGFIDSLEA VDIASPGLEF LEGSHFWEGQ CRMLQPDASE AETFYRDAVG VDANGAAIED PKNVSCYGHM FSVWETLFAI KEGMEACGWR GPQDRQAFVE AVEAFTDMPA GRERPQGAKV FNAKLHQAFG HQFITKLEGG KLVKVHETSI EDSLYESDVD YTAMSF
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