Gene Rsph17025_2718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2718 
Symbol 
ID5085296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2754452 
End bp2755153 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content72% 
IMG OID640484281 
ProductABC transporter related 
Protein accessionYP_001168910 
Protein GI146278751 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.743331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCC TCGAGGCCCG TGGCCTCGTG CGCCACTTCG GTGGCCTGCG CGCGATCGAC 
GGGGTGGATT TCGACCTCGC GCCCGGCGAG ATCCACGCGC TGATCGGGCC GAACGGGGCG
GGCAAGTCCA CGCTGGTGGG CCTTCTGTCC GGCCGGATCC CGGCGCAGGA GGGCACGATC
CGCTTTGACG GGCGCGACAT CACGCGCCTG CCCGCCCACG CGCGGGTGCG CTGCGGCATC
GCCTATGCCT TCCAGATCAC CTCGGTCTTT CCGCGCCTCA CGACCTTCGA CAATGTGGCG
CTGGCCGTGC AGCGCGCGGG CGCCCGCGAT CTGGCCGCCG CGACGGGGGC CGCGCTGGCG
CGGGTGGGGC TCGAGGCCGA GGCGGACCGG ATGGCGGGTG CCCTCTCTTA CGGGCATCAG
CGCCTCCTGG AGATCGCGAT GGGCCTCGCG CTCGAGCCGC GCCTGCTGAT CCTCGACGAG
CCGACGCAAG GTCTGGCTGC GGGCGAGATC GAGGGGTTCA AGACCCTGGT GCGGGGGCTG
GTGCCCAGGG TCACGGTGCT TCTGATCGAG CACAACATGG AGGTGGTGAT GGACCTTGCC
GAGCGCATCA CGGTGCTGAA CAACGGCCGG GTTCTGGCGC AGGGCACGCC CGCCGAGATC
CGGGCCGACC GCGCGGTGCA GGCCGCCTAT CTCGGAGGCT GA
 
Protein sequence
MSLLEARGLV RHFGGLRAID GVDFDLAPGE IHALIGPNGA GKSTLVGLLS GRIPAQEGTI 
RFDGRDITRL PAHARVRCGI AYAFQITSVF PRLTTFDNVA LAVQRAGARD LAAATGAALA
RVGLEAEADR MAGALSYGHQ RLLEIAMGLA LEPRLLILDE PTQGLAAGEI EGFKTLVRGL
VPRVTVLLIE HNMEVVMDLA ERITVLNNGR VLAQGTPAEI RADRAVQAAY LGG