| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2712 |
|---|
| Symbol | rbcL |
|---|
| ID | 5085290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 2748132 |
|---|
| End bp | 2749592 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640484275 |
|---|
| Product | ribulose bisophosphate carboxylase |
|---|
| Protein accession | YP_001168904 |
|---|
| Protein GI | 146278745 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACCA AGAACACCGA GATCAAGGGC AAGGAACGCT ACAAGGCGGG CGTCCTGAAA
TATGCCCAGA TGGGCTATTG GGACGGGGAC TATCAGCCCA AGGACACCGA CGTGCTGGCG
CTGTTCCGCA TCACGCCGCA GGAGGGGGTG GACCCGATCG AGGCCGCGGC CGCGGTGGCG
GGCGAAAGCT CGACCGCGAC CTGGACCGTG GTCTGGACCG ACCGGCTGAC CGCCTGCGAC
AGCTACCGCG CCAAGGCCTA CAAGGTCGAA CCCGTGCCCG GAACGCCGGG GCAGTATTTC
TGCTACGTCG CCTACGACCT GATCCTGTTC GAGGAAGGCT CGATCGCCAA CCTGACGGCT
TCGATCATCG GCAACGTCTT CAGCTTCAAG CCGCTCAAGG CCGCGCGGCT CGAGGACATG
CGCTTCCCCG TCGCCTATGT GAAGACCTAC AAGGGTCCGC CGACCGGCAT CATCGTGGAA
CGTGAGCGGC TGGACAAGTT CGGCAAGCCC TTGCTCGGCG CCACGACGAA GCCGAAGCTC
GGCCTGTCGG GCAAGAACTA CGGCCGCGTG GTCTATGAGG GGCTGAAGGG TGGCCTCGAC
TTCATGAAGG ACGACGAGAA CATCAACTCG CAGCCCTTCA TGCATTGGCG CGACCGCTTC
CTCTATGTGA TGGAGGCGGT AAACCTCGCC TCGGCCCAGA CCGGCGAGGT GAAGGGCCAC
TACCTCAACA TCACCGCCGG CACGATGGAG GAAATGTACC GCCGGGCCGA GTTCGCCAAG
TCGCTGGGCT CGGTCATCGT GATGGTGGAC CTGATCATCG GCTATACCGC GATCCAGTCG
ATCTCGGAGT GGTGCCGGCA GAACGACATG ATCCTGCACA TGCACCGCGC GGGCCACGGC
ACCTACACCC GGCAGAAGAA CCACGGGATC AGCTTCCGCG TGATCGCCAA GTGGCTGCGG
CTGGCGGGCG TGGACCACCT GCATTGCGGC ACCGCCGTCG GCAAGCTGGA GGGCGATCCG
CCGACCGTTC AGGGCTACTA CAACGTCTGC CGCGAGCCGT TCAACACGGT GGACCTGCAG
CGCGGCCTCT TCTTCGAGCA GGACTGGGCG GATCTGAAGA AGGTCATGCC GGTCGCCTCG
GGCGGCATCC ACGCGGGGCA GATGCACCAG CTGCTGAGCC TCTTCGGGGA TGACGTGGTG
CTGCAGTTCG GCGGCGGCAC CATCGGCCAC CCGATGGGCA TCCAGGCCGG CGCGACGGCG
AACCGCGTGG CGCTGGAGGC GATGGTCCTG GCCCGCAACG AGGGCCGCAA CATCGACGTG
GAAGGCCCCG AGATCCTGCG CGCCGCCGCC AAATGGTGCA AGCCGCTGGA GGCCGCCCTC
GATACCTGGG GCAACATCAC CTTCAACTAC ACCTCCACCG ACACGTCGGA CTTCGTGCCG
ACCCCCTCGG TCTCGATGTA A
|
|---|
| Protein sequence | MDTKNTEIKG KERYKAGVLK YAQMGYWDGD YQPKDTDVLA LFRITPQEGV DPIEAAAAVA
GESSTATWTV VWTDRLTACD SYRAKAYKVE PVPGTPGQYF CYVAYDLILF EEGSIANLTA
SIIGNVFSFK PLKAARLEDM RFPVAYVKTY KGPPTGIIVE RERLDKFGKP LLGATTKPKL
GLSGKNYGRV VYEGLKGGLD FMKDDENINS QPFMHWRDRF LYVMEAVNLA SAQTGEVKGH
YLNITAGTME EMYRRAEFAK SLGSVIVMVD LIIGYTAIQS ISEWCRQNDM ILHMHRAGHG
TYTRQKNHGI SFRVIAKWLR LAGVDHLHCG TAVGKLEGDP PTVQGYYNVC REPFNTVDLQ
RGLFFEQDWA DLKKVMPVAS GGIHAGQMHQ LLSLFGDDVV LQFGGGTIGH PMGIQAGATA
NRVALEAMVL ARNEGRNIDV EGPEILRAAA KWCKPLEAAL DTWGNITFNY TSTDTSDFVP
TPSVSM
|
|---|
| |