| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2680 |
|---|
| Symbol | |
|---|
| ID | 5084468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 2718965 |
|---|
| End bp | 2719981 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640484243 |
|---|
| Product | alanine racemase |
|---|
| Protein accession | YP_001168872 |
|---|
| Protein GI | 146278713 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.769144 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.967228 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCAGA AAGTCGCCAC GATTCAGGAT GTTGCCCGGC TGTCGGGGGT CTCGACCGCC
ACGGTGAGCC GCACCCTGTC GCACCCCGAA CGCGTGGCCG AGACCACACG CGAGGCCGTC
CTGCGCGCGG TGCGCGACAC GGGATATGTC GCGAACTCGA TGGCGAGGAA CCTGCGGCGG
CGGCGCACGG GCAGCATCCT TGCGCTGGTG CCGAACCTCG CCAATCCGTT CTTCTCGGAG
ATCCTCTCGG GCCTCGCCTC CGTCCTGACG CCTGCGGGCT ACGGTCTTCT GATCGCGGAT
ACGCACACGG ACCCGGCCGG CCGGCTGGCC CATTATCTCG AGAGCGGGCT GGCCGACGGG
GTGGTGATCT TCGACGGAAG CCTGCCTCTC GAGACGCTGG CCACGCGGCG GCGACCGCCG
GTGATCCTTG CCTGCGAATG GATGGGCGAG GCGCTGCCCT CGGTCCGGGT GGACAATGCG
GCAGGGGCCG AGATCGCGAT CCGGCACCTG CACGAGATGG GGCACCGGCG CATCGGCCAT
GTGATGGGCC CCGCGGGCAA CGTGCTGACC GAAAGCAGGC TCGAGGGCGT GAGACGGGCG
CGCGGCGACC TCGGGCTGCC GCTGCGCGAC GACTGGATCT TCCGCGGCGA CTTCGGGCTG
GCCTCGGGGT CGGCGGCGGC GATGACGTGG CTCGCTCTCA AGGACCGCCC CACCGCGGTC
TTCTGCGCCT CGGACGAGAT GGCCTGCGGC TTCATGGGGG CCCTGCAGCA TGCGGGCATC
GCGGTTCCGG CGGATGTTTC GGTGGTGGGC TTTGACGATA TCGAGGTGGT GGCCCATCTC
ACGCCGGCGC TGACCACGAT CCGCCAACCG CGCCGCCTGA TCGGGCGCCG GGCGGCCGAA
CTGCTGTCGG CCATGATCGA CACGCGCACC CTCACCGGCC CGTCCGAACT GCTGCCCGTG
GAGCTGATCC GGCGGCAGAG CGTTGCACCT CCTTGCGGCA CAGGAGCATC CCCATGA
|
|---|
| Protein sequence | MPQKVATIQD VARLSGVSTA TVSRTLSHPE RVAETTREAV LRAVRDTGYV ANSMARNLRR
RRTGSILALV PNLANPFFSE ILSGLASVLT PAGYGLLIAD THTDPAGRLA HYLESGLADG
VVIFDGSLPL ETLATRRRPP VILACEWMGE ALPSVRVDNA AGAEIAIRHL HEMGHRRIGH
VMGPAGNVLT ESRLEGVRRA RGDLGLPLRD DWIFRGDFGL ASGSAAAMTW LALKDRPTAV
FCASDEMACG FMGALQHAGI AVPADVSVVG FDDIEVVAHL TPALTTIRQP RRLIGRRAAE
LLSAMIDTRT LTGPSELLPV ELIRRQSVAP PCGTGASP
|
|---|
| |