Gene Rsph17025_2673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2673 
Symbol 
ID5084461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2714345 
End bp2715058 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content69% 
IMG OID640484236 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_001168865 
Protein GI146278706 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.510131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCATAT CCGCGAGAGT GCCCATGCGT GAGATCGTCC TCGACACCGA AACCACCGGC 
TTCGAACCCT CCGAGGGCCA CCGGATCGTC GAGATCGGGG CGGTCGAGCT GTTCAACCAC
ATGCCGACCG GGCGGACCTA CCACCAGTAT ATCAACCCCG AGCGGCCGAT GCCGAACGAG
GCCTTCGAGG TCCACGGGCT TGGTGACGAG TTCCTGCGGG ACAAGCCGGT CTTTTCCGAG
ATCGGCTCGG CCTTCCTCGA GTTCGTGGGC GAGGCGCGGC TGGTGATCCA CAACGCCGCC
TTCGACATGA AATTCCTGAA CTTCGAGCTG GGGCGGGTCG GGCTGCCCCG CCTGCCGTTC
GAAAGGGCGC TCGACACGCT GGCGCTGGCA CGAAAGCGGT TCCCCGGCGC GCCCGCGACG
CTCGACGCGC TCTGCCGCCG GTTCGGCGTG GACAATTCGG CGCGCGAAAA GCACGGGGCG
CTGCTCGACA GCGAGATCCT GGCCGAGGTC TATCTGGAAC TGATCGGCGG CCGGCAGCCG
GATTTCGGCC TGTCCGCGGC ATCCGGCACG CGGTCGGGCG GCGCCGAGGG CGAGTGGCGC
CCGCGTCCCC GGCCCGTGGC GCTGCCGCCC CGGATCACCG AGGAAGAGGC CGCCGCCCAT
GCCGCCTTCG TGGCAAAGCT GGGCGACGGC GCGATCTGGC TCAAGCGGGC CTGA
 
Protein sequence
MPISARVPMR EIVLDTETTG FEPSEGHRIV EIGAVELFNH MPTGRTYHQY INPERPMPNE 
AFEVHGLGDE FLRDKPVFSE IGSAFLEFVG EARLVIHNAA FDMKFLNFEL GRVGLPRLPF
ERALDTLALA RKRFPGAPAT LDALCRRFGV DNSAREKHGA LLDSEILAEV YLELIGGRQP
DFGLSAASGT RSGGAEGEWR PRPRPVALPP RITEEEAAAH AAFVAKLGDG AIWLKRA