Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2673 |
Symbol | |
ID | 5084461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 2714345 |
End bp | 2715058 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640484236 |
Product | DNA polymerase III, epsilon subunit |
Protein accession | YP_001168865 |
Protein GI | 146278706 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.510131 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCCCATAT CCGCGAGAGT GCCCATGCGT GAGATCGTCC TCGACACCGA AACCACCGGC TTCGAACCCT CCGAGGGCCA CCGGATCGTC GAGATCGGGG CGGTCGAGCT GTTCAACCAC ATGCCGACCG GGCGGACCTA CCACCAGTAT ATCAACCCCG AGCGGCCGAT GCCGAACGAG GCCTTCGAGG TCCACGGGCT TGGTGACGAG TTCCTGCGGG ACAAGCCGGT CTTTTCCGAG ATCGGCTCGG CCTTCCTCGA GTTCGTGGGC GAGGCGCGGC TGGTGATCCA CAACGCCGCC TTCGACATGA AATTCCTGAA CTTCGAGCTG GGGCGGGTCG GGCTGCCCCG CCTGCCGTTC GAAAGGGCGC TCGACACGCT GGCGCTGGCA CGAAAGCGGT TCCCCGGCGC GCCCGCGACG CTCGACGCGC TCTGCCGCCG GTTCGGCGTG GACAATTCGG CGCGCGAAAA GCACGGGGCG CTGCTCGACA GCGAGATCCT GGCCGAGGTC TATCTGGAAC TGATCGGCGG CCGGCAGCCG GATTTCGGCC TGTCCGCGGC ATCCGGCACG CGGTCGGGCG GCGCCGAGGG CGAGTGGCGC CCGCGTCCCC GGCCCGTGGC GCTGCCGCCC CGGATCACCG AGGAAGAGGC CGCCGCCCAT GCCGCCTTCG TGGCAAAGCT GGGCGACGGC GCGATCTGGC TCAAGCGGGC CTGA
|
Protein sequence | MPISARVPMR EIVLDTETTG FEPSEGHRIV EIGAVELFNH MPTGRTYHQY INPERPMPNE AFEVHGLGDE FLRDKPVFSE IGSAFLEFVG EARLVIHNAA FDMKFLNFEL GRVGLPRLPF ERALDTLALA RKRFPGAPAT LDALCRRFGV DNSAREKHGA LLDSEILAEV YLELIGGRQP DFGLSAASGT RSGGAEGEWR PRPRPVALPP RITEEEAAAH AAFVAKLGDG AIWLKRA
|
| |