| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2669 |
|---|
| Symbol | |
|---|
| ID | 5084457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 2711477 |
|---|
| End bp | 2711974 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640484232 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001168861 |
|---|
| Protein GI | 146278702 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1981] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00701] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00312015 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.333956 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATGC CCAACCGCTT CGAGGAGATC ACGATGGGCA CGTTCCTGGC CGACTACTAC
CTGTGGACCA AGTCGCTTCA CGTGATCTCG GTGCTGGCCT GGATGGCGGG GCTGTTCTAC
CTGCCGCGCC TCTTCGTCTA TCACGCGGAG GTCGTGAAAA CCGGAACCGA GACCGACACG
CTCTTTCAGA CGATGGAGCG GCGGCTTCTG CGGGCCATCA TGAACCCTGC GATGATCGCG
ACCTGGATCT TCGGCCTCGC GCTCGTCTTC ACGCCGGGGA TCGTGGATTG GTCGATGCTC
TGGCCCTGGA CGAAGGCCGC ATCCGTCATC GCGATGACGG CCTTCCACAT GTGGCTCGCC
GCCCGCCGCA AGGACTTTGC CGCCGGGACG AACAGCCGGG CGGGGCGCAC CTACCGCATG
ATGAACGAGC TGCCGACGCT TCTCATGCTG GTGATCGTCT TCTCGGCGGT CGCCAAGTGG
AACTTCTGGG ACTTCTGA
|
|---|
| Protein sequence | MQMPNRFEEI TMGTFLADYY LWTKSLHVIS VLAWMAGLFY LPRLFVYHAE VVKTGTETDT
LFQTMERRLL RAIMNPAMIA TWIFGLALVF TPGIVDWSML WPWTKAASVI AMTAFHMWLA
ARRKDFAAGT NSRAGRTYRM MNELPTLLML VIVFSAVAKW NFWDF
|
|---|
| |