Gene Rsph17025_2658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2658 
Symbolrph 
ID5084446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2701355 
End bp2702068 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content69% 
IMG OID640484221 
Productribonuclease PH 
Protein accessionYP_001168850 
Protein GI146278691 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0689] RNase PH 
TIGRFAM ID[TIGR01966] ribonuclease PH 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.624871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.811384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCCTT CCGGCAGAAA GCTCGACCAG ATGCGGTCGG TGTCCATCGA GCCCAACGTG 
ATGAAACATG CCGAGGGCTC GTGCCTCATC CGCATGGGCG AGACGCATGT GCTCTGCTCG
GCCTCGATCG AGGACAAGCC GCCGCCGTTC CTGAAGAACA CGGGCCTCGG CTGGGTGACG
GCCGAATACG GGATGCTGCC GCGCGCCACC ACCTCGCGCA ACCGGCGCGA AGCCACCGCC
GGCAAACAGA GCGGCCGCAC GCAGGAGATC CAGCGCCTGA TCGGCCGCGC GCTGCGCGCC
GGCATCGACC GCTCGGCGCT GGGTGAGCGG CAGATCGTGA TCGACTGCGA CGTGCTGCAG
GCCGACGGCG GCACCCGCTG CGCCTCGATC ACAGGCGGGT GGGTCGCGCT GCGGCTGGCC
GTCAACAAGC TGCTCAAGGC CGGGATCGTG GTCTCGGACC CGATCGTGGA TCACGTCGCG
GCCGTCTCTT GCGGGATCTA CGCCGGCCAG CCGGTCCTTG ACCTCGACTA TGCCGAGGAT
TCCACCGCCG GCACCGATGG CAACTTTGTC CTGACCGGCC GGCAGCGGCT GATCGAGGTG
CAGATGTCGG CCGAGGGCGC CAGCTTCTCG CGCGACGAGA TGGGCCAGCT GCTCGACCTC
GCCGAGGCGG GCATCGCCGA TCTGGTGGCG GCGCAGAAGG CGGCGCTCGG ATGA
 
Protein sequence
MRPSGRKLDQ MRSVSIEPNV MKHAEGSCLI RMGETHVLCS ASIEDKPPPF LKNTGLGWVT 
AEYGMLPRAT TSRNRREATA GKQSGRTQEI QRLIGRALRA GIDRSALGER QIVIDCDVLQ
ADGGTRCASI TGGWVALRLA VNKLLKAGIV VSDPIVDHVA AVSCGIYAGQ PVLDLDYAED
STAGTDGNFV LTGRQRLIEV QMSAEGASFS RDEMGQLLDL AEAGIADLVA AQKAALG