Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2658 |
Symbol | rph |
ID | 5084446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 2701355 |
End bp | 2702068 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640484221 |
Product | ribonuclease PH |
Protein accession | YP_001168850 |
Protein GI | 146278691 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.624871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.811384 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTCCTT CCGGCAGAAA GCTCGACCAG ATGCGGTCGG TGTCCATCGA GCCCAACGTG ATGAAACATG CCGAGGGCTC GTGCCTCATC CGCATGGGCG AGACGCATGT GCTCTGCTCG GCCTCGATCG AGGACAAGCC GCCGCCGTTC CTGAAGAACA CGGGCCTCGG CTGGGTGACG GCCGAATACG GGATGCTGCC GCGCGCCACC ACCTCGCGCA ACCGGCGCGA AGCCACCGCC GGCAAACAGA GCGGCCGCAC GCAGGAGATC CAGCGCCTGA TCGGCCGCGC GCTGCGCGCC GGCATCGACC GCTCGGCGCT GGGTGAGCGG CAGATCGTGA TCGACTGCGA CGTGCTGCAG GCCGACGGCG GCACCCGCTG CGCCTCGATC ACAGGCGGGT GGGTCGCGCT GCGGCTGGCC GTCAACAAGC TGCTCAAGGC CGGGATCGTG GTCTCGGACC CGATCGTGGA TCACGTCGCG GCCGTCTCTT GCGGGATCTA CGCCGGCCAG CCGGTCCTTG ACCTCGACTA TGCCGAGGAT TCCACCGCCG GCACCGATGG CAACTTTGTC CTGACCGGCC GGCAGCGGCT GATCGAGGTG CAGATGTCGG CCGAGGGCGC CAGCTTCTCG CGCGACGAGA TGGGCCAGCT GCTCGACCTC GCCGAGGCGG GCATCGCCGA TCTGGTGGCG GCGCAGAAGG CGGCGCTCGG ATGA
|
Protein sequence | MRPSGRKLDQ MRSVSIEPNV MKHAEGSCLI RMGETHVLCS ASIEDKPPPF LKNTGLGWVT AEYGMLPRAT TSRNRREATA GKQSGRTQEI QRLIGRALRA GIDRSALGER QIVIDCDVLQ ADGGTRCASI TGGWVALRLA VNKLLKAGIV VSDPIVDHVA AVSCGIYAGQ PVLDLDYAED STAGTDGNFV LTGRQRLIEV QMSAEGASFS RDEMGQLLDL AEAGIADLVA AQKAALG
|
| |