Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2654 |
Symbol | |
ID | 5084442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2694478 |
End bp | 2696733 |
Gene Length | 2256 bp |
Protein Length | 751 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640484217 |
Product | malic enzyme |
Protein accession | YP_001168846 |
Protein GI | 146278687 |
COG category | [C] Energy production and conversion |
COG ID | [COG0280] Phosphotransacetylase [COG0281] Malic enzyme |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.820528 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAAGA CCAAGATCAC GCCCGAAGAG GCGCTTCTCT ACCATCTCGA ACCGCGGCCG GGCAAATACG AGATCGTCGC CTCGACGCCC ATGGCGACGC AGCGCGACCT GAGCCTCGCT TATTCGCCAG GGGTGGCCGT CCCGGTGCAG GCGATCGCCG ACGCGCCCGA GACGGTCTAT GACTACACGG TCAAGGGCAA CATGGTGGCC GTGGTCTCGA ACGGGACCGC GATCCTCGGC ATGGGCAACC TCGGTGCGAT GGCCTCGAAG CCGGTGATGG AGGGCAAGGC GGTCCTCTTC AAGCGCTTCG CCGACGTGAA CGCCATCGAC ATCGAACTCG ACACCGAGAA TCCCGACGAG ATCATCCAGG CGGTCAGGCT GATGGGGCCG ACCTTCGGCG GCATCAACCT TGAGGACATC AAGGCGCCCG AGTGCTTCAT CATCGAGCAG CGGCTGAAGG AACTCATGGA CATCCCGGTG TTCCATGACG ACCAGCACGG CACGGCGGTG ATCTGCGCGG CGGGTCTCAT CAACGCGCTG GAGCTGTCGG GCAAGAAGAT CGAGGATTGC CGCATCGTGC TGAACGGTGC AGGGGCGGCG GGGATTGCCT GCCTGGAACT CCTCAAGACG ATGGGCGCGC GGCACGACAA CTGCATCATG TGCGACACCA AGGGCGTGAT CTGGCAGGGC CGCACCGAGG GCATGAACCA GTGGAAGTCG GCCCATGCGG CGAAGACCGA CTGCCGCACG CTGGAAGAGG CGATGGTGGG GGCCGATGTC TTCCTCGGCG TCTCGGCCAA GGGCGCGGTG ACGCCGGCGA TGGTGGCCTC GATGGCCGAG AACCCGGTGA TCTTCGCCAT GGCGAACCCC GATCCCGAGA TCACGCCCGA AGAGGCGCAC GCCGTCCGCG CCGATGCGAT TGTGGCGACC GGCCGGTCGG ACTATCCGAA CCAGGTGAAC AACGTCCTGG GCTTCCCCTA CCTGTTCCGC GGCGCACTGG ACATCCACGC CCGCGCCATC AACGACGAGA TGAAGATCGC CTGCGCCAAG GCGCTGGCCG CGCTCGCGCG CGAGGATGTG CCGGACGAGG TGGCGATGGC CTACGGCCGC AAGCTCTCGT TCGGGCGCGA CTACATCATT CCCACGCCGT TCGATCCGCG GCTGATCTAC ACGATCCCGC CGGCGGTGGC GAAGGCGGGG ATGGATACCG GCGTTGCGCG CCGCCCGATC ATCGACCTGC AGGGCTACGA GCTGGCGCTC AAGTCGCGGA TGGACCCGAC CGCCTCGATC CTGCAGGGCA TCCATGCGCG GGCCAAGGCG GCGCAGGCCC GGATGATCTT TGCCGAGGGC GACGATCCGC GCGTGCTGCG CGCCGCCGTG GCCTACCAGC GCGCTGGCAT GGGCAAGGCG CTGGTGGTGG GCCGCGAGCA TGACGTGCGC GAGAAGCTGG AGGCCGCCGG CCTCGGCGAT GCGGTGCGCG AGCTCGAGGT GGTGAACGCC GCCAACTCGC GCCACATGGA TGCCTACAAG CAGTTCCTCT ACAACCGCCT CCAGCGCGGC GGTTTCGACA GCTACGACAT CCAGCGGCTG GCGACGCGCG ACCGGCATGT GTTCTCGGCG CTGATGCTGG CGCATGGGCA TGGCGACGGC CTCGTGACCG GGGCCACGCG CAAGTCGGCC TATGTCATGC AGCTCATCAA TCACGTCTTC GACGCCAAGG CGTCGGACGG GGCCGTGGGC GTAACGGCGC TGCTGCACAA GGGCCGGATC GTCCTGATCG CCGACACGCT GGTGCATGAA TGGCCCGAGC CCGAGGATCT GGCCAACATC GCCATCAAGT CGGCCCGCGT GGCGCGGAAC CTCGGGCTCG AGCCGCGGGT GGCCTTCGTC TCCTTCTCGA CCTTCGGCTA TCCGGTCTCC GAGCGGGCGG CGAAGATGGG CGCTGCCTCG CGCGTGCTGG ACGCGATGAA GGTCGATTTC GAATATGAGG GCGAAATGAC CGTGGACGTG GCGCTGAACC CGGCGGCCAT GGCGCAATAT CCGTTCTGCC GGCTGAGCGG GCCGGCGAAC ATCCTCGTCG TGCCCGCGCG TCACTCGGCC TCGATCTCGA TCAAGCTGAT GCAGGAGATG GCCGGGGCCA CCGTCATCGG GCCGATCCTC ACGGGCGTGT CGAAGCCGAT CCAGATCTGC TCGGTCAATT CCACCGTGAA CGACATCCTG AACATGGCCG TCATGGCGGC CTGCAAGGTG GGCTGA
|
Protein sequence | MTKTKITPEE ALLYHLEPRP GKYEIVASTP MATQRDLSLA YSPGVAVPVQ AIADAPETVY DYTVKGNMVA VVSNGTAILG MGNLGAMASK PVMEGKAVLF KRFADVNAID IELDTENPDE IIQAVRLMGP TFGGINLEDI KAPECFIIEQ RLKELMDIPV FHDDQHGTAV ICAAGLINAL ELSGKKIEDC RIVLNGAGAA GIACLELLKT MGARHDNCIM CDTKGVIWQG RTEGMNQWKS AHAAKTDCRT LEEAMVGADV FLGVSAKGAV TPAMVASMAE NPVIFAMANP DPEITPEEAH AVRADAIVAT GRSDYPNQVN NVLGFPYLFR GALDIHARAI NDEMKIACAK ALAALAREDV PDEVAMAYGR KLSFGRDYII PTPFDPRLIY TIPPAVAKAG MDTGVARRPI IDLQGYELAL KSRMDPTASI LQGIHARAKA AQARMIFAEG DDPRVLRAAV AYQRAGMGKA LVVGREHDVR EKLEAAGLGD AVRELEVVNA ANSRHMDAYK QFLYNRLQRG GFDSYDIQRL ATRDRHVFSA LMLAHGHGDG LVTGATRKSA YVMQLINHVF DAKASDGAVG VTALLHKGRI VLIADTLVHE WPEPEDLANI AIKSARVARN LGLEPRVAFV SFSTFGYPVS ERAAKMGAAS RVLDAMKVDF EYEGEMTVDV ALNPAAMAQY PFCRLSGPAN ILVVPARHSA SISIKLMQEM AGATVIGPIL TGVSKPIQIC SVNSTVNDIL NMAVMAACKV G
|
| |