Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2628 |
Symbol | |
ID | 5085052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2671306 |
End bp | 2671950 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640484191 |
Product | sugar transferase |
Protein accession | YP_001168820 |
Protein GI | 146278661 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCCCCG CGAAGCGTCT GCTGGACCTG ATCGTGGCGC TGGCGCTGGT GCTTGTGTTG GCGCTGCCCT TCGCGCTGTT GCTGCTGATC CTGCTTGTCG TCGAGGGCCG GCCGCTGTTT TACGTGGCCG AGCGCATGAG GGCGCCGAAT GAGCCGTTCC AGCTCTGGAA GCTGCGCACG ATGCGGGCGG CCGCGAGGAA CGACGGCGTT TCGGGCGGTG ACAAGGCCAA CCGGATCACG CGCACCGGCC GGTTCCTGCG ACGCACGCGC CTCGACGAGA TCCCGCAGCT CTGGAACGTT CTGCGCGGCG ACATGAGCTT TGTCGGGCCA AGACCTCCGC TTCGACGCTA TGTCGAAGAT TACCGCGACC TCTATGCGCG CGTCCTGCGC AGCCGGCCGG GAATTACCGG GCTGGCCAGT CTCCATTTCC ACAGGCACGA GGAATGGCTT CTCGCACAAT GCCGAACGGC CGAGGAAACG GACCGCACCT ACAGGGAGAG ATGTATCCCC CGAAAGGCGA AGCTTGACCT CATCTATCAG CAGAGGCGCA CCCTCTGTCT GGATCTGGCG CTCATGTACC AGACGGTTGC GCGCGTCATG GTGTTGCGCA ATCGGCAACC TTTTGCAAAG GAACGCAGAG CATAG
|
Protein sequence | MTPAKRLLDL IVALALVLVL ALPFALLLLI LLVVEGRPLF YVAERMRAPN EPFQLWKLRT MRAAARNDGV SGGDKANRIT RTGRFLRRTR LDEIPQLWNV LRGDMSFVGP RPPLRRYVED YRDLYARVLR SRPGITGLAS LHFHRHEEWL LAQCRTAEET DRTYRERCIP RKAKLDLIYQ QRRTLCLDLA LMYQTVARVM VLRNRQPFAK ERRA
|
| |