| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2627 |
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| Symbol | |
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| ID | 5085051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 2669273 |
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| End bp | 2671159 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640484190 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001168819 |
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| Protein GI | 146278660 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGAAAC TCCTGTTCGG TCTGGTGGAC CGACTGACCC GAGGTCAGAA GCGCGCCGCG
ATGCTTCTGT CGGATCTTCT GGTGGCGCCG CTCGCGCTGC TTCTGACCGG GATCTTCATC
CGGGGTCAGG CCTCCGCATT CGAGTGGGTG CTCTTCCCGG CCTCCGTGCT GATCGCGGGC
GGGATTTCCA TGCTGCTCGG GATGCCGCGG ATCAAGCTCA ATGCCTATGA GTCGGTGGCG
ATCCTGAAGA CCGCCGCCTT CGCCTCGATC CTGACCATGG CGCTGGCGCT GGTGGCCACG
CTTTCGGGTG TGGATGTTCC TGCGGCGGCA GCCATCCTCC ATGGCTTGCT GTTCTTCATC
CTTGCCGTGG GCACCCGGAT GGCGATGCTG CACGCCCTGC TCTGGGTGCT TCAGGTCGAG
CAGAAGGGGT GCCGGGTCAT CATCTATGGC GCGGGCAACA CGGGCACGCA GCTTGCGGCC
GCGCTCCGGT CGAGGGGGGC CATCCGTCCC ATCGCCTTCG TCGATGACAA CCGGACGCTT
CACGGCATGA TCATCGGCGG CCTCAAGGTC CATCCGGCCG AGCGGCTCGA GCGGCTGGTG
CGCGAGCGCG ACGTCACGCG TGTCCTCCTG GCGATGCCAT CGGAGTCGCC TGCCCGCCTT
GCGAAGATCG TCCAGCGGCT TCAGGCGGTG GGTCTCGACG TCCAGACGGT TCCGTCCTTC
GCGCAACTCG TGGGCGAGGA GAAGCTTGTC GACAACCTCT CTCCCTTCAC CTTCGGGCGG
TTCCTGGGGC GTCAGCAGAT CGAGGATGCG CTGCCGCAGG GCGCCGAAGC CTATGTCGGG
CGCTCGGTCC TTGTCTCCGG CGCGGGTGGC TCGGTCGGGT CGGAACTTTG CCGTCAGCTT
CTGCTGATCC GCCCCCGGTG CATCGTGCTG TTCGAGATCA GCGAGATCGC GCTCTACAAC
ATCGACCGCG AACTGCGAGA GATGGCTGAG GGCACCGGAG TGGAGATCGT GCCCGTCCTC
GGCTCGGTGA CGGATTCGCG CCTCGCGCGC ATGGTGATGC AGGATCACGG GATCGAGGTC
GTCTTCCATG CGGCCGCCTA CAAGCATGTT CCGCTGGTCG AGCACAATCC GATTGCCGGT
CTGGCCAACA ACGTGCTTGG CACCCGCACG CTCGCCGATG CGGCACATGA GGCCAGGGTG
GCGCGCTTCA TCCTGATCTC GACCGACAAG GCGGTGCGTC CCACCAATGT CATGGGCGCC
TCCAAGCGTC TGGCCGAACT GGTGATCCAG GATCTGGCCA AGAGGTCGAA GGGCACGATC
TTCTCGATGG TGCGTTTCGG GAACGTGCTT GGATCCTCGG GCTCCGTCAT CCCGCTCTTC
AAGGAGCAGA TCGCGCGCGG CGGCCCCGTG ACGCTCACAC ACGAGGATGT CACCCGCTTC
TTCATGACGA TTTCCGAGGC GGCGCGTCTG GTGCTGCTGG CGGGATCCTT CGCCCATCAG
GCTGAAAGCT GCGGGGGCGA CGTCTTCGTG CTCGACATGG GCAAGCCGGT GCGCATCCGC
GATCTGGCCG TGCAGATGAT CGAGGCCGCG GGCAAGTCGG TTCGGGATGA GCGCCACCCC
TTTGGCGATA TCGAGATCGT GGTGACGGGC CTTCGTCCCG GCGAGAAGCT GCATGAGGAA
CTGCTCATCG GCGAGGGACT GCTCACGACG CCGCATTCCA AGATCCTCCG GGCGCAGGAG
GACAGCCTCT CCGAACTCGA GATGGCGACG GCCCTTCGGG CGCTGCGAAG CGCAATGGCG
ACCGGCGATG CAGAGGCCGC GCGCCGGGTG ATTCTCTCGT GGGTTGAGGG CTACAGACTC
CCCGAGGTTG TGGCGGCAAA GCGATAG
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| Protein sequence | MKKLLFGLVD RLTRGQKRAA MLLSDLLVAP LALLLTGIFI RGQASAFEWV LFPASVLIAG
GISMLLGMPR IKLNAYESVA ILKTAAFASI LTMALALVAT LSGVDVPAAA AILHGLLFFI
LAVGTRMAML HALLWVLQVE QKGCRVIIYG AGNTGTQLAA ALRSRGAIRP IAFVDDNRTL
HGMIIGGLKV HPAERLERLV RERDVTRVLL AMPSESPARL AKIVQRLQAV GLDVQTVPSF
AQLVGEEKLV DNLSPFTFGR FLGRQQIEDA LPQGAEAYVG RSVLVSGAGG SVGSELCRQL
LLIRPRCIVL FEISEIALYN IDRELREMAE GTGVEIVPVL GSVTDSRLAR MVMQDHGIEV
VFHAAAYKHV PLVEHNPIAG LANNVLGTRT LADAAHEARV ARFILISTDK AVRPTNVMGA
SKRLAELVIQ DLAKRSKGTI FSMVRFGNVL GSSGSVIPLF KEQIARGGPV TLTHEDVTRF
FMTISEAARL VLLAGSFAHQ AESCGGDVFV LDMGKPVRIR DLAVQMIEAA GKSVRDERHP
FGDIEIVVTG LRPGEKLHEE LLIGEGLLTT PHSKILRAQE DSLSELEMAT ALRALRSAMA
TGDAEAARRV ILSWVEGYRL PEVVAAKR
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