Gene Rsph17025_2620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2620 
Symbol 
ID5085044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2658009 
End bp2659286 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content71% 
IMG OID640484183 
ProductROK family protein 
Protein accessionYP_001168812 
Protein GI146278653 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.92 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGGC AGATCCGCAA GCGCGCCGCG CCCGAGCCGA CCACTGGCTG CGGGCCCCTG 
ATTCCGCCGC TCGCCGAAAC CTCGCGCTCG CTGCGCCAGC AGGTGTTCGA GCGGGTGCGG
GCCGCGGGTC TGACCGCCCG GGTGCAGGTG GCGCGCGATC TCGGCGTCAG CCCGGCCTCG
GTCACGACCA TCGTCTCGGA ACTGATCGAG GCCGGGCTGG TCGAGGAGGT GGCCACACGC
CGCGGCGGAG AAAGCGGCCG GGGCCGGCCG GTCGTCGCGC TGGGGGTGCG GGGGGCGGCG
CATCGCGTGG TCGGCCTCAA GATCTCGGAT CGCGACCTGT CGGCCGTGGT GATGGACTTC
GCCGGCCGGC TGCTCGCCGA ACATCACGAG GAACGCCGCC CCGTGGCCCT GGCGCCGGCC
TCGCTTCTCG CGGTGCTCGA GACGCTGCTC GACCGGGTGA CGGCCAAGGC CGGCCTTGCG
CGGCAGGAGC TTGCCGCGGT GGGCATCGGT CTGCCCGGCT ATGTGGACAG CACCGGCGGG
CGGGTGCTCT GGTCCTCGAT CCTGGCCGAG CGGGACGTGC CGCTGGGGCG GCTTGCGACC
GAGCGGCTGG GCCTGCCGGT GCAGGTGGAC AATGACGCGA ACCTCTGCGC GATGGCCGAA
CTGTGGTTCG GGGCCGGGCG TCGGCTGTCG GATTTCGTGG TCGTCACGAT CGAGCACGGG
CTCGGGATGG GGATGGTCAC CAACCACCGG ATCTTCCGCG GCGCCCGCGG CATCGGGATG
GAGCTTGGCC ACACCAAGGT GCAGCTCGAC GGCGCGCTCT GCCGCTGCGG GCAACGCGGC
TGCCTCGAAG CCTATGTGGC CGACTATGCC CTCGCACGCG AGGCGACGAC CGCCCTCAAC
TGGACGCATC GGGAAAGCCA GTCGATGGCG ATTCTGCTCG AGAGTCTGCA CGACCATGCC
AAGGCGGGCA ACCAGGCGGC GCGCTCGATC TTCCGACGAG CGGGGCGCTA CCTCGCGGTC
GGGCTGGCCA ATATCGTGAA TCTCGTCGAT CCGCCGCTCA TAATCCTCGC CGGTGCCCGG
CTGCGCTTCG ACTATCTCTA CGCCGAAGAC ACGCTGGCCG AGATGAACGC CCTCGTGCTC
GCGACCGGCC GCCCCCTGCC CGAGATCGAG ATCCACGCCT GGGGCGAGAT GCTCTGGGCA
CACGGAGCGG CCGCCCTCGC CCTGTCCGCG CTGGGAGAGC GGCTCGTTGC GCCTGTGCGC
GACGTGGCCG CGCAATAG
 
Protein sequence
MSRQIRKRAA PEPTTGCGPL IPPLAETSRS LRQQVFERVR AAGLTARVQV ARDLGVSPAS 
VTTIVSELIE AGLVEEVATR RGGESGRGRP VVALGVRGAA HRVVGLKISD RDLSAVVMDF
AGRLLAEHHE ERRPVALAPA SLLAVLETLL DRVTAKAGLA RQELAAVGIG LPGYVDSTGG
RVLWSSILAE RDVPLGRLAT ERLGLPVQVD NDANLCAMAE LWFGAGRRLS DFVVVTIEHG
LGMGMVTNHR IFRGARGIGM ELGHTKVQLD GALCRCGQRG CLEAYVADYA LAREATTALN
WTHRESQSMA ILLESLHDHA KAGNQAARSI FRRAGRYLAV GLANIVNLVD PPLIILAGAR
LRFDYLYAED TLAEMNALVL ATGRPLPEIE IHAWGEMLWA HGAAALALSA LGERLVAPVR
DVAAQ