Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2620 |
Symbol | |
ID | 5085044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 2658009 |
End bp | 2659286 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640484183 |
Product | ROK family protein |
Protein accession | YP_001168812 |
Protein GI | 146278653 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.92 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCGGC AGATCCGCAA GCGCGCCGCG CCCGAGCCGA CCACTGGCTG CGGGCCCCTG ATTCCGCCGC TCGCCGAAAC CTCGCGCTCG CTGCGCCAGC AGGTGTTCGA GCGGGTGCGG GCCGCGGGTC TGACCGCCCG GGTGCAGGTG GCGCGCGATC TCGGCGTCAG CCCGGCCTCG GTCACGACCA TCGTCTCGGA ACTGATCGAG GCCGGGCTGG TCGAGGAGGT GGCCACACGC CGCGGCGGAG AAAGCGGCCG GGGCCGGCCG GTCGTCGCGC TGGGGGTGCG GGGGGCGGCG CATCGCGTGG TCGGCCTCAA GATCTCGGAT CGCGACCTGT CGGCCGTGGT GATGGACTTC GCCGGCCGGC TGCTCGCCGA ACATCACGAG GAACGCCGCC CCGTGGCCCT GGCGCCGGCC TCGCTTCTCG CGGTGCTCGA GACGCTGCTC GACCGGGTGA CGGCCAAGGC CGGCCTTGCG CGGCAGGAGC TTGCCGCGGT GGGCATCGGT CTGCCCGGCT ATGTGGACAG CACCGGCGGG CGGGTGCTCT GGTCCTCGAT CCTGGCCGAG CGGGACGTGC CGCTGGGGCG GCTTGCGACC GAGCGGCTGG GCCTGCCGGT GCAGGTGGAC AATGACGCGA ACCTCTGCGC GATGGCCGAA CTGTGGTTCG GGGCCGGGCG TCGGCTGTCG GATTTCGTGG TCGTCACGAT CGAGCACGGG CTCGGGATGG GGATGGTCAC CAACCACCGG ATCTTCCGCG GCGCCCGCGG CATCGGGATG GAGCTTGGCC ACACCAAGGT GCAGCTCGAC GGCGCGCTCT GCCGCTGCGG GCAACGCGGC TGCCTCGAAG CCTATGTGGC CGACTATGCC CTCGCACGCG AGGCGACGAC CGCCCTCAAC TGGACGCATC GGGAAAGCCA GTCGATGGCG ATTCTGCTCG AGAGTCTGCA CGACCATGCC AAGGCGGGCA ACCAGGCGGC GCGCTCGATC TTCCGACGAG CGGGGCGCTA CCTCGCGGTC GGGCTGGCCA ATATCGTGAA TCTCGTCGAT CCGCCGCTCA TAATCCTCGC CGGTGCCCGG CTGCGCTTCG ACTATCTCTA CGCCGAAGAC ACGCTGGCCG AGATGAACGC CCTCGTGCTC GCGACCGGCC GCCCCCTGCC CGAGATCGAG ATCCACGCCT GGGGCGAGAT GCTCTGGGCA CACGGAGCGG CCGCCCTCGC CCTGTCCGCG CTGGGAGAGC GGCTCGTTGC GCCTGTGCGC GACGTGGCCG CGCAATAG
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Protein sequence | MSRQIRKRAA PEPTTGCGPL IPPLAETSRS LRQQVFERVR AAGLTARVQV ARDLGVSPAS VTTIVSELIE AGLVEEVATR RGGESGRGRP VVALGVRGAA HRVVGLKISD RDLSAVVMDF AGRLLAEHHE ERRPVALAPA SLLAVLETLL DRVTAKAGLA RQELAAVGIG LPGYVDSTGG RVLWSSILAE RDVPLGRLAT ERLGLPVQVD NDANLCAMAE LWFGAGRRLS DFVVVTIEHG LGMGMVTNHR IFRGARGIGM ELGHTKVQLD GALCRCGQRG CLEAYVADYA LAREATTALN WTHRESQSMA ILLESLHDHA KAGNQAARSI FRRAGRYLAV GLANIVNLVD PPLIILAGAR LRFDYLYAED TLAEMNALVL ATGRPLPEIE IHAWGEMLWA HGAAALALSA LGERLVAPVR DVAAQ
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