Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2616 |
Symbol | |
ID | 5085040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2653196 |
End bp | 2654632 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640484179 |
Product | xylulokinase |
Protein accession | YP_001168808 |
Protein GI | 146278649 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
TIGRFAM ID | [TIGR01312] D-xylulose kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.252562 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTACATCG GTCTCGATCT CGGGACGTCC GGGCTCAAGG GCATCCTGAT CGACGAAGGC CAGCGCGTGC TGGCCGAGGC GAGCGCGCCT CTCACTGTCA GCCGTCCGCA CGAGGGGTGG TCCGAACAGT CGCCGGCCGA CTGGATCGCC GCGGCCGAGG CGGTGATGGA CCAGCTTGCG GCGCAGGGGC TTGCGGGCGT GAAGGGCATC GGGCTCTCGG GCCAGATGCA CGGCGCGACG CTGCTGGATG CCTCGGACGA GGTGCTGCGG CCCTGCATCC TGTGGAACGA CACCCGCAGC CATGCCGAGG CGACGGAACT GGATGCCGAT CCGCGGTTTC GGGCCATCAC CGGCAACATC GTCTTTCCGG GCTTCACCGC GCCCAAGCTG GCCTGGGTCG CGCGGCACGA GCCGGCGATC CGGGCGCGGG TGGCGCGGGT TCTGCTGCCC AAGGATTACC TGCGGCTCTG GCTGACGGGC GAGCATGTCG CCGAGATGTC GGACGCCGCC GGGACGAGCT GGCTGGATGT CGGCGCGCGC GACTGGTCGG ACGAACTTCT GGCCGCGACC GACCTCTCGC GCGAGGCGAT GCCGCGGCTG GTCGAGGGTT CGGCCGTGTC GGGTGAGTTG CGCCCGGCGC TGGCCGCCCG CTGGGGCTTG CCCCAAAGGG TGGTCGTGGC GGGCGGAGGC GGCGACAACG CCGCCTCGGC CGTGGGGGTG GGCGTGGTCC GCGCAGGCGA GGCCTTCGTC AGCCTTGGCA CCTCCGGGGT GCTGTTTGCC GCCACCGACG GCTACCAGCC GGCGCCGGAG ACGGCCGTTC ATACCTTCTG CCACGCCCTG CCCGAGGCGT GGCACCAGAT GGGCGTGATC CTCGCCGCGA CCGACGCGCT GAACTGGTAT GCGCGGCTGG TGGGGCAGGA GGCGCGGGTG CTGACCGGCG ACCTTGGCGC GCTTCAGGCG CCGGGGCGTG CGTTGTTCCT GCCCTATCTC GGGGGCGAGC GGACGCCGCT GAACGACGCG GCGATCCGCG GCGCCTTCAC CGGGCTCGAA CATGCGACCG ACCGCGCCGC CGGAACGCGG GCCGTTCTGG AAGGCGTGAC CTTCGCCATC CGCGACTGCC GCGACGCGCT GGCCGCGACG GGAACCCGGC TGGAGAGCCT TCTGGCCGTC GGCGGCGGCT CGCGCTCGGA CTACTGGCTG TCGGCCATCG CGACGGCGCT GGACGTGCCG GTGCTGCTGC CTGCGGCGGG CGACTTCGGC GGCGCCTTCG GGGCCGCGCG CCTTGCGCTG ATGGCCGCGA CCGGGGCCGG GGCCGAGATC GCGACCCTGC CGCCCATCGC CCGCACCATC CCGCCCGAGC GCGGCCTCAC GTCCGCCTTC GACGACGCAC ACGCGCGCTA TCGCGCCGCC CAGACAGCCA TCAGGAGCCT CACATGA
|
Protein sequence | MYIGLDLGTS GLKGILIDEG QRVLAEASAP LTVSRPHEGW SEQSPADWIA AAEAVMDQLA AQGLAGVKGI GLSGQMHGAT LLDASDEVLR PCILWNDTRS HAEATELDAD PRFRAITGNI VFPGFTAPKL AWVARHEPAI RARVARVLLP KDYLRLWLTG EHVAEMSDAA GTSWLDVGAR DWSDELLAAT DLSREAMPRL VEGSAVSGEL RPALAARWGL PQRVVVAGGG GDNAASAVGV GVVRAGEAFV SLGTSGVLFA ATDGYQPAPE TAVHTFCHAL PEAWHQMGVI LAATDALNWY ARLVGQEARV LTGDLGALQA PGRALFLPYL GGERTPLNDA AIRGAFTGLE HATDRAAGTR AVLEGVTFAI RDCRDALAAT GTRLESLLAV GGGSRSDYWL SAIATALDVP VLLPAAGDFG GAFGAARLAL MAATGAGAEI ATLPPIARTI PPERGLTSAF DDAHARYRAA QTAIRSLT
|
| |