| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2612 |
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| Symbol | |
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| ID | 5085036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 2648211 |
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| End bp | 2648987 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640484175 |
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| Product | type III secretion system inner membrane R protein |
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| Protein accession | YP_001168804 |
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| Protein GI | 146278645 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.151679 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGT TTGAACAGGC CACCGAGCTG ACCCTGATGG TCCAGGACCT GTTCCGGGCG
GGCTTTCTGG TCTTCATCCG GGTCGGAGCC GCCATGGCCC TGCTGCCCGC CTTCGGAGAG
ATGACGCTGC CGGCCCGCGT GCGGCTGACC ATCGCCCTTG CCTTCACCGC CATCGTCTTC
CCGGCCGTGA GTGACGGGGT GCCCGCCTTC GACGGCTCGC CGGTGGCCCT CGGCATCGAG
GCCGCGATCG GCCTCGTTCT CGGGATCTCC TTGCGGCTCT TCGTGCTGGC GTTGCAGACG
GCCGGCACCG TCGCGGCCCA GGCCGTGTCG CTGTCCCAGA TGTTCGGATC GCCGTCGGGC
GAGCCGCAGC CCGTCATCGG CAACGTCCTG ACGCTCGCCG GTCTCGCGAT CGCGGTTGCG
GGAGGCCTGC ATGTGCGCCT GGCCGAGTTT CTGATCCTGT CCTATGACCT CCTGCCCGCG
GCGCGTCTTC CGGTCGCGGG TGACGTGGCG GACTGGGGCC TGCACCTGAT CGTGCACACC
TTCGCCCTCG CCTTCATGCT GTCGATGCCG TTCGTGGCCG CGTCCTTCGT GTTCAACGTG
GCGCTCGGCA TCATCAACCG CGCCATGCCG CAACTCATGG TGTTCTTTGT GGGCGCGCCC
GCCCTCACAT TCGGCGGGCT TGTGCTGCTC GCCCTGTCCG CCCCGCTTGC ACTCGGGCTC
TGGGTGACGC GGCTCGGCGA TTTCCTCGAC AATCCCTCCC TCGTGGCGCC GCCATGA
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| Protein sequence | MTLFEQATEL TLMVQDLFRA GFLVFIRVGA AMALLPAFGE MTLPARVRLT IALAFTAIVF
PAVSDGVPAF DGSPVALGIE AAIGLVLGIS LRLFVLALQT AGTVAAQAVS LSQMFGSPSG
EPQPVIGNVL TLAGLAIAVA GGLHVRLAEF LILSYDLLPA ARLPVAGDVA DWGLHLIVHT
FALAFMLSMP FVAASFVFNV ALGIINRAMP QLMVFFVGAP ALTFGGLVLL ALSAPLALGL
WVTRLGDFLD NPSLVAPP
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