| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2580 |
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| Symbol | ispH |
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| ID | 5085195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 2619775 |
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| End bp | 2620734 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640484143 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001168773 |
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| Protein GI | 146278614 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0014454 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCAAGC CCCCCCTCAC CCTCTATCTG GCCGCGCCGC GCGGCTTCTG CGCGGGCGTG
GATCGCGCGA TCAAGATCGT CGAGATGGCG CTCGAGAAAT GGGGGGCGCC GGTCTATGTC
CGCCATGAGA TCGTCCACAA CAAGTTCGTC GTGGATCGGC TGCGCGACAT GGGCGCCGTC
TTCGTCGAGG AACTCGACGA GGCGCCGACG GACCGCCCGG TGATCTTCTC GGCGCATGGC
GTGCCCAAGT CGGTCCCGGC CGAGGCCGAG CGGCGCAACA TGGTCTATGT CGATGCCACC
TGCCCGTTGG TCAGCAAGGT CCATCTCGAG GCCGAGCGCC ACCATGAGAA CGGCCTGCAG
ATGATCATGA TCGGGCACGC CGGCCACCCC GAGACGATCG GGACGATGGG CCAGCTACCC
GAAGGCGAGG TGCTGCTGGT CGAGACGGTC GAGGATGTGG CGGGGCTAGA GGTGCGCGAC
CCCGAGCGGT TGGCCTACAT CACCCAGACG ACGCTGTCGA TCGACGACAC GGCGGCGATC
GTGGCGGCGC TGCGCGAGCG TTTCCCGGCC ATCAACATCC CGCGCAAGGA AGACATCTGC
TACGCGACCA CCAACCGTCA GGGAGCGGTC AAGGCGCTTT CGGACCGGAT CGAGGCCCTC
CTCGTGATTG GCGCGCCGAA CTCGTCGAAC TCCCGGCGTC TGGTCGAGGT CGGGCGCGCG
GCCGGCTGCC GCGTGGCGCA GCTCGTGCAG CGGGCGACCG AGATCGACTG GGACTCGCTT
CAGGGGGTGA CGGCCGTGGG GGTTGCCGCA GGCGCCTCGG CGCCCGAAGT GCTGGTGGAC
GAGGTGATCG CGGCCTTCCG CGAGCGGTTC GACACGACGG TCGAGCTGGT CGAGACCGTG
AAGGAGCGGG TCGAGTTCAA GGTGCCGCGC ATCCTGCGCG AAGCCGCCGA AACTCCGTGA
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| Protein sequence | MTKPPLTLYL AAPRGFCAGV DRAIKIVEMA LEKWGAPVYV RHEIVHNKFV VDRLRDMGAV
FVEELDEAPT DRPVIFSAHG VPKSVPAEAE RRNMVYVDAT CPLVSKVHLE AERHHENGLQ
MIMIGHAGHP ETIGTMGQLP EGEVLLVETV EDVAGLEVRD PERLAYITQT TLSIDDTAAI
VAALRERFPA INIPRKEDIC YATTNRQGAV KALSDRIEAL LVIGAPNSSN SRRLVEVGRA
AGCRVAQLVQ RATEIDWDSL QGVTAVGVAA GASAPEVLVD EVIAAFRERF DTTVELVETV
KERVEFKVPR ILREAAETP
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