| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2576 |
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| Symbol | |
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| ID | 5085191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 2615762 |
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| End bp | 2617879 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640484139 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001168769 |
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| Protein GI | 146278610 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0223055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACG TCGAAGACCT GATCGCCCTG GTCCGCAATT ACAACCCGCG CACCAATGCC
GACCTCATTC GCCGGGCCTA TGCCTATGGC CGGCAGATGC ACGAGGGGCA GTTCCGCCAC
TCGGGCGAGC CCTATTTCAC CCATCCCGTC GCCGTCGCCG CCATCCTGAC CGAGCAGCGG
CTGGATGATG CGACGATCGT GACCGCGCTG CTGCACGACA CGATCGAGGA CACCAAGTCC
ACCTACACCG AGGTTGCGCG TCTTTTCGGC GATGACATCG CCGAACTGGT GAACGGCGTG
ACCAAGCTCA CCAATCTCGA ACTGTCCTCG GCGCAGTCGA AGCAGGCCGA GAACTTCCGC
AAGCTGTTCA TGGCGATGTC CAAGGACCTG CGGGTGATCC TCGTCAAGCT TGCCGACCGT
CTGCACAACA TGCGCACGAT CAAGTCGATG CGCTCCGAGA AGCAGGCCCA GAAGGCGCGC
GAGACGATGG AGATCTTCGC CCCTCTCGCC GGCCGCATGG GCATGCAGTG GATGCGCGAG
GAGTTGGAAG ACCTCGCCTT CCGCGTGCTG AACCCCGAGG CGCGCAACTC GATCATCCGC
CGCTTCATCA CGCTGCAGCG CGAGACGGGC GACGTGGTCC ACAAGATCAC CGCCGACATC
CGGCTGGAGC TGGAAAAGGC CCAGATCGAG GCCGACGTCT ATGGCCGCGC CAAGAAGCCC
TATTCGATCT GGCGCAAGAT GCAGGAGAAG GACCTCGCCT TCTCGCGGCT GTCGGACATC
TACGGCTTCC GCGTGATCTG CAAGGACGTG GCCGACTGTT ACCGCATCCT CGGCGTGATC
CACCAGCGTT GGCGCGCGGT GCCGGGGCGG TTCAAGGACT ATGTGAGCCA GCCGAAGTCG
AACGGCTACC GCTCGATCCA CACCACGGTC TCGGGGCGCG ACGGCAAGCG GGTCGAGGTG
CAGATCCGCA CCCGCCAGAT GCACGAGGTG GCCGAGGCGG GCGTCGCGGC GCACTGGAGC
TACCGCGAGG GTGTGCGGGT CCACAACCCC TTCGCCGTCG ATCCCGCCAA GTGGATCGCG
AGCCTGACGG AACGGCTCGA CGAGGACGAC CACGACGAGT TCATGGAGAA CGTGAAGCTC
GAGATGTACA CCGACCAGGT GTTCTGCTTC ACGCCGAAGG GCGACGTGAT CCAGCTGCCT
CGGGGGGCGA CGCCGCTGGA TTTTGCCTAT GCCATCCATA CAAGGATCGG CCATTCCACG
GTCTCGGCCA AGATCGACGG CATCCGCGTG CCGCTCTGGA CGCGGCTGAA GAACGGCCAG
TCCGTCGAGA TCATCACCGC CGAGGGCCAG CGTCCGCAGG CCTCCTGGAT CGACATCGCC
ACGACGGGCC GGGCCAAGGC CGCGATCCGC CGCAGCCTGC GCGAGGAAGA CCGGGGCCGC
TTCGTCAAGC TGGGGCAGGA GCTGGCCCGC GCGGCCTTCG ATCATGTGGG CCGCAAGGCG
ACCGACAAGG CGCTCAGGAC CGCGGCCAAG ATGCTCGGAC TGCCGGACGA GACCGAGCTT
CTGGCGCAGC TCGGTTCGGC CGAGCTGACG GCGCGCAAGG TGGTCGAGAC CCTGTATCCC
GAACTCGCGC GCTCGAGCGG CCCCGAGGTG GATGTGCGGC GCCCCGTCGT GGGCCTGTCC
GACGACCAGC AGTTCCGTCG GGCGAAATGC TGTCAGCCGG TGCCCGGCGA GCGGATCGTG
GGCATCACCT ACCGCGGGCA GGGCGTGGTC ATCCATGCCA TCGACTGCCC CGCGCTGGAG
GAGTTCGAAG AGCAACCGTC GCGCTGGATC GACCTGCACT GGCACACCGG CCGCCATGCG
GCGGTGCATA CCGTGACGCT CGATCTGACC ATATCCAACG ACGCGGGCGT GCTTGGCCGG
ATCTGCACCT TGATCGGCGA GCAGAAGGCC AATATCTCCG ACCTGAGGTT CACGGATCGC
AAGCCCGACT TCTACCGTCT TCTGGTTGAT GTGGATCTGC GCGACGTCGA GCATCTGCAT
ACGCTGATGA CGGCTCTCGA GGCCGAAACG GACGTGGCGC AGATCACGCG GCACCGCGAT
CTGAGCAGGA AACCCTGA
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| Protein sequence | MIDVEDLIAL VRNYNPRTNA DLIRRAYAYG RQMHEGQFRH SGEPYFTHPV AVAAILTEQR
LDDATIVTAL LHDTIEDTKS TYTEVARLFG DDIAELVNGV TKLTNLELSS AQSKQAENFR
KLFMAMSKDL RVILVKLADR LHNMRTIKSM RSEKQAQKAR ETMEIFAPLA GRMGMQWMRE
ELEDLAFRVL NPEARNSIIR RFITLQRETG DVVHKITADI RLELEKAQIE ADVYGRAKKP
YSIWRKMQEK DLAFSRLSDI YGFRVICKDV ADCYRILGVI HQRWRAVPGR FKDYVSQPKS
NGYRSIHTTV SGRDGKRVEV QIRTRQMHEV AEAGVAAHWS YREGVRVHNP FAVDPAKWIA
SLTERLDEDD HDEFMENVKL EMYTDQVFCF TPKGDVIQLP RGATPLDFAY AIHTRIGHST
VSAKIDGIRV PLWTRLKNGQ SVEIITAEGQ RPQASWIDIA TTGRAKAAIR RSLREEDRGR
FVKLGQELAR AAFDHVGRKA TDKALRTAAK MLGLPDETEL LAQLGSAELT ARKVVETLYP
ELARSSGPEV DVRRPVVGLS DDQQFRRAKC CQPVPGERIV GITYRGQGVV IHAIDCPALE
EFEEQPSRWI DLHWHTGRHA AVHTVTLDLT ISNDAGVLGR ICTLIGEQKA NISDLRFTDR
KPDFYRLLVD VDLRDVEHLH TLMTALEAET DVAQITRHRD LSRKP
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