Gene Rsph17025_2549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2549 
Symbol 
ID5084726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2591531 
End bp2592706 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content64% 
IMG OID640484112 
Productelongation factor Tu 
Protein accessionYP_001168742 
Protein GI146278583 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.812394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGG CAAAGTTTGA ACGTAACAAA CCGCACGTCA ACATCGGCAC GATCGGCCAC 
GTTGACCACG GCAAGACGAC GCTGACGGCC GCGATCACGA AGTATTTCGG CGAGTTCCGG
GCCTATGACC AGATCGACGG CGCGCCGGAA GAGCGGGCCC GCGGCATCAC GATCTCGACC
GCGCACGTGG AATACGAGTC GGAGTCGCGT CACTATGCGC ACGTCGACTG CCCCGGCCAC
GCTGACTATG TGAAGAACAT GATCACCGGC GCCGCGCAGA TGGACGGCGC GATCCTCGTG
GTGAACGCGG CCGACGGCCC GATGCCGCAG ACGCGCGAGC ACATCCTGCT CGGCCGTCAG
GTGGGCATCC CCTACATGGT CGTCTACATG AACAAGGTCG ACCAGGTGGA CGATCCGGAA
CTTCTCGAAC TGGTCGAGAT GGAGATCCGT GAACTTCTGT CGTCCTACGA CTACCCCGGC
GACGACATTC CGATCATCAA GGGCTCGGCT CTGGCCGCGA TGAACGGCAC CGACAAGGAA
ATCGGCGAGG ATTCGATCCG CGCGCTGATC GCGGCGGTGG ACGAATACAT CCCGACCCCG
GCGCGCGCCG TGGACCAGCC GTTCCTGATG CCGGTCGAGG ACGTGTTCTC GATCTCGGGC
CGCGGCACCG TGGCCACCGG CCGGATCGAG CGTGGCGTGG TGAAGGTGGG TGAGGAACTC
GAGATCGTCG GCATCCGCCC GTCGAAGAAG ACGGTCTGCA CCGGCGTCGA GATGTTCCGC
AAGCTTCTGG ACCAGGGCGA GGCGGGCGAC AACGTGGGCC TTCTGCTGCG CGGCGTGGAC
CGCGACGGGA TCGAGCGCGG CCAGGTGCTG TGCAAGCCCG GCTCGGTGAA GCCGCACACG
AAGTTCGAGG CCGAGGCCTA CATCCTGACG AAAGAGGAAG GCGGCCGTCA CACGCCGTTC
TTCGCGAACT ACCGTCCGCA GTTCTACTTC CGCACGACCG ACGTGACGGG CACGGTGGAA
CTGCCGGAAG GCACCGAGAT GGTGATGCCG GGCGACAACC TGAAGTTCAA CGTCGAACTG
ATCGCGCCGA TCGCCATGGA AGAGAAGCTC CGCTTCGCCA TCCGTGAAGG CGGCCGCACC
GTCGGCGCCG GCGTCGTCTC GAAAATCATC GCCTGA
 
Protein sequence
MAKAKFERNK PHVNIGTIGH VDHGKTTLTA AITKYFGEFR AYDQIDGAPE ERARGITIST 
AHVEYESESR HYAHVDCPGH ADYVKNMITG AAQMDGAILV VNAADGPMPQ TREHILLGRQ
VGIPYMVVYM NKVDQVDDPE LLELVEMEIR ELLSSYDYPG DDIPIIKGSA LAAMNGTDKE
IGEDSIRALI AAVDEYIPTP ARAVDQPFLM PVEDVFSISG RGTVATGRIE RGVVKVGEEL
EIVGIRPSKK TVCTGVEMFR KLLDQGEAGD NVGLLLRGVD RDGIERGQVL CKPGSVKPHT
KFEAEAYILT KEEGGRHTPF FANYRPQFYF RTTDVTGTVE LPEGTEMVMP GDNLKFNVEL
IAPIAMEEKL RFAIREGGRT VGAGVVSKII A