| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2542 |
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| Symbol | rpoB |
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| ID | 5083995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 2583476 |
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| End bp | 2587609 |
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| Gene Length | 4134 bp |
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| Protein Length | 1377 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640484104 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_001168735 |
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| Protein GI | 146278576 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAGA GCTACGTTGG CCAGAAACGT ATCCGCAGGT ACTACGGCAA GATCCGCGAA
GTGCTGGAGA TGCCGAACCT GATCGAGGTT CAGAAATCCT CCTACGATCT GTTCCTGAAG
TCCGGCGAGG GCCCGAAGGC GGCCGATGGC GAAGGCATCC AGGGTGTCTT CCAGTCGGTC
TTCCCGATCA AGGACTTCAA CGAGACCGCC GTGCTCGAGT TCGTGAAATA CGAGCTGGAG
AAGCCGAAGT ACGACGTGGA CGAGTGCCAG CAGCGCGACA TGACCTATGC CGCGCCGCTG
AAGGTGACCC TGCGTCTGAT CGTGTTCGAT GTGGACGAGA CCACGGGCGC CCGCTCGGTC
AAGGACATCA AGGAGCAGGA CGTCTACATG GGTGACATGC CCCTGATGAC CGCGAACGGC
ACGTTCATCG TGAACGGCAC CGAGCGCGTG ATCGTCAGCC AGATGCACCG TTCCCCGGGG
GTGTTCTTCG ACCATGACAA GGGCAAGACC CATTCCTCGG GCAAGCTGCT CTTTGCCTGC
CGGATCATTC CCTACCGCGG CTCGTGGCTC GACTTCGAGT TCGACGCCAA GGACATCGTC
TTCGCCCGGA TCGACCGCCG CCGGAAGCTG CCGGTGACGA CGCTGCTCTA TGCCCTCGGC
ATGGATCAGG AAGGCATCAT GGATGCCTAC TACGACACGG TGGACTTCAA GTATCAGAAG
AACCGCGGCT GGGTCACGCG CTTCTTCCCC GAGCGGGTGC GCGGCACCCG CCCGACCTAT
GATCTGGTCG ATGCGGCCAC CGGCGAGGTC ATCCTGAAGG CGGGCGAGAA GGCCACGCCG
CGGATGGTCA AGAAGTGGAT CGACGACGCC CAGATCACCG AGCTTCTGGT GCCGTTCGAC
CATATCGTCG GCCGCTATGT CGCCCGCGAC ATCATCAATG AGGAAACCGG CGAGATCTGG
GTCGAAGCCG GCGACGAACT CACGATGGAG TATGACCGCG ACGGCGAGGT GAAGGGCGGG
ACGCTGAAGC TCTTGCTCGA CCAGGGCATC ACCGACATTC CGGTGCTCGA CATCGACAAC
GTGAACGTCG GCCCCTACAT CCGCAACACC ATGGCGGCGG ACAAGAACAT GGGCCGCGAC
ACCGCGCTCA TGGACATCTA CCGCGTGATG CGTCCGGGCG AGCCGCCGAC CGTCGAGGCC
GCGGCGGCGC TGTTCGACAC GCTGTTCTTC GACAGCGAGC GCTATGACCT GTCGGCCGTC
GGCCGCGTGA AGATGAACAT GCGTCTGGAT CTCGGCAAGC CCGACACCCA GCGCACGCTC
GACCGCGACG ACATCATCGC CTGCATCAAG GCGCTGACCG AACTGCGCGA CGGCAAGGGT
GAGATCGACG ACATCGACCA CCTCGGCAAC CGCCGGGTGC GCTCGGTCGG CGAGCTGATG
GAGAACCAGT ATCGCGTGGG TCTCCTGCGG ATGGAGCGGG CGATCAAGGA GCGCATGTCC
TCGGTCGAGA TCGACACGAT CATGCCGCAG GACCTGATCA ACGCCAAGCC GGCCGCGGCC
GCGGTGCGCG AGTTCTTCGG CTCGTCGCAG CTGTCGCAGT TCATGGACCA GACCAACCCG
CTGTCGGAAG TCACCCACAA GCGGCGTCTC TCGGCCCTCG GGCCGGGCGG TCTGACCCGT
GAGCGTGCGG GCTTCGAGGT GCGCGACGTT CACCCGACCC ACTACGGCCG AATGTGCCCG
ATCGAGACGC CGGAAGGCCA GAACATCGGT CTGATCAACT CGCTCGCGAC CTTCGCCCGC
GTGAACAAGT ACGGCTTCAT CGAGACCCCC TACCGCAAGG TGATCGAGGG GCAGGTGACC
GACGACGTGG TCTACATGTC GGCGACCGAA GAGATGCGCC ACACCGTGGC GCAGGCCAAC
GCGACGCTCG ACGAGGAAGG CCGATTCGTC TCGGACCTGA TCTCGTCGCG CAAGGCGGGC
GAGTTCATGC TGAACCCGCC GGATGCCATC GACCTGATCG ACGTGTCGCC GAAGCAGCTC
GTGTCGGTCG CGGCCTCGCT GATCCCGTTC CTCGAGAACG ACGACGCGAA CCGCGCTCTG
ATGGGCTCGA ACATGCAGCG TCAGGCCGTG CCGCTCCTGC AATCCGACGC GCCCTTCGTG
GGCACGGGGA TCGAGGCCGT GGTGGCGCGT GACTCGGGCG CCGCCATCAT GGCGCGCCGC
GCCGGCGTGA TCGACCAGGT GGACGCAACG CGAATCGTCG TGCGCGCCAC CGAGATGCTG
GAGCCGGGCG AGCCGGGTGT CGACATCTAC CGTCTGCGCA AGTTCAAGCG CTCGAACCAG
TCGTCCTGCA TCAACCAGCG TCCGCTGGTG AAGGTGGGCG ACGTGGTGCA CCGCGGCGAG
GTGGTGGCCG ACGGTCCCTG CACCGACATG GGCGAACTCG CCCTTGGTCG GAACGTGGTC
GTGGCCTTCA TGCCGTGGAA CGGCTACAAC TACGAGGACT CGATCCTGAT CTCCGAGCGC
ATCCTGCGCG ATGACGTCTA CACCTCGATC CACATCGAGG AATACGAGGT CGCCGCCCGT
GACACCAAGC TCGGGCCGGA AGAGATCACC CGCGACATTC CGAACGTCGG CGAGGAAGCC
CTGCGCAACC TCGACGAGGC GGGCATCGTC TATATCGGCG CCGAAGTGCA GCCGGGCGAC
ATCCTCGTGG GCAAGATCAC GCCGAAGGGC GAAAGCCCGA TGACGCCCGA GGAAAAGCTC
CTCCGCGCCA TCTTCGGCGA GAAGGCGTCG GACGTGCGGG ATACCTCGCT GCGCCTGCCG
CCGGGGGCTT ACGGCACCAT CGTGGAAGTG CGGGTCTTCA ACCGCCACGG CGTCGACAAG
GACGAGCGTG CGTTGCAGAT CGAGCGCGAA GAGGTCGAAC GCCTCGCCCG CGACCGGGAC
GACGAGCTGG CGATCCTCGA GCGCAACATC TATTCGCGCC TCAAGACGCT GATCATGGGC
AAGGTCGCCG TGAAGGGCCC GAAGGGCATC AAGGCGGGCT CCGAGATCAA CGACGAGCTG
CTGTCCACGC TCTCGCGCGG GCAGTGGTGG CAGCTGGCGC TGGGTGAGGA AGCCGACGCG
AAGGAAGTCG AGGCCCTCCA CGAGCAGTTC GAGGCGCAGA AACGCGCGCT CGATCACCGC
TTCGAGGACA AGGTCGAGAA GGTCCGCCGC GGCGACGACC TGCCTCCGGG CGTGATGAAG
ATGGTCAAGG TGTTCGTCGC GGTGAAGCGC AAGCTGCAGC CGGGCGACAA GATGGCCGGC
CGTCACGGCA ACAAGGGCGT CATCTCGAAG GTGGTGCCGA TCGAGGACAT GCCGTTCCTT
GCGGACGGCA CGCATGTCGA CCTCGTGCTC AACCCGCTGG GCGTGCCCTC GCGGATGAAC
GTGGGTCAGA TCCTCGAGAC GCACATGGGC TGGGCCGCGC GCGGTCTGGG CATCCAGATC
GACGAGGCGC TGCAGGACTA CCGCCGCTCG GGCGACCTGA CCCCGGTCAA GGAAGCCATG
CGGCTCGCCT ATGGCGACGA GACTTATGAA GGGGCCTTCG CCGACCGCGA TGACGAGGAT
CTGGTGGAGA TGGCCAGCCG CGTCACCAAG GGCGTGCCGA TCGCGACCCC GGTCTTCGAC
GGTGCGAAGG AGCCGGACGT CAACGACGCC CTGCGCCGCG CGGGCTTCGA CCAGAGCGGG
CAGTCCATCG TCTTCGACGG CCGGACGGGC GAGCAGTTCG CGCGTCCCGT CACCGTGGGC
GTCAAGTACA TGCTGAAGCT GCACCACCTG GTCGATGACA AGCTGCACGC GCGCTCGACC
GGTCCGTACT CGCTCGTCAC CCAGCAGCCG CTGGGCGGCA AGGCGCAGTT CGGTGGCCAG
CGTCTGGGCG AGATGGAGGT CTGGGCGCTC GAAGCCTACG GCGCCGCCTA CACCCTGCAG
GAGATGCTGA CGGTGAAGTC GGACGACGTG GCGGGCCGCA CGAAGATGTA CGAGTCGATC
GTCAAGGGCG AGGACAACTT CGAGGCGGGC GTCCCGGAGT CGTTCAACGT GCTCGTCAAG
GAAGTGCGGG GCCTCGGCCT CAACATGGAA CTCCTGGATG CGGACGAGGA ATAA
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| Protein sequence | MAQSYVGQKR IRRYYGKIRE VLEMPNLIEV QKSSYDLFLK SGEGPKAADG EGIQGVFQSV
FPIKDFNETA VLEFVKYELE KPKYDVDECQ QRDMTYAAPL KVTLRLIVFD VDETTGARSV
KDIKEQDVYM GDMPLMTANG TFIVNGTERV IVSQMHRSPG VFFDHDKGKT HSSGKLLFAC
RIIPYRGSWL DFEFDAKDIV FARIDRRRKL PVTTLLYALG MDQEGIMDAY YDTVDFKYQK
NRGWVTRFFP ERVRGTRPTY DLVDAATGEV ILKAGEKATP RMVKKWIDDA QITELLVPFD
HIVGRYVARD IINEETGEIW VEAGDELTME YDRDGEVKGG TLKLLLDQGI TDIPVLDIDN
VNVGPYIRNT MAADKNMGRD TALMDIYRVM RPGEPPTVEA AAALFDTLFF DSERYDLSAV
GRVKMNMRLD LGKPDTQRTL DRDDIIACIK ALTELRDGKG EIDDIDHLGN RRVRSVGELM
ENQYRVGLLR MERAIKERMS SVEIDTIMPQ DLINAKPAAA AVREFFGSSQ LSQFMDQTNP
LSEVTHKRRL SALGPGGLTR ERAGFEVRDV HPTHYGRMCP IETPEGQNIG LINSLATFAR
VNKYGFIETP YRKVIEGQVT DDVVYMSATE EMRHTVAQAN ATLDEEGRFV SDLISSRKAG
EFMLNPPDAI DLIDVSPKQL VSVAASLIPF LENDDANRAL MGSNMQRQAV PLLQSDAPFV
GTGIEAVVAR DSGAAIMARR AGVIDQVDAT RIVVRATEML EPGEPGVDIY RLRKFKRSNQ
SSCINQRPLV KVGDVVHRGE VVADGPCTDM GELALGRNVV VAFMPWNGYN YEDSILISER
ILRDDVYTSI HIEEYEVAAR DTKLGPEEIT RDIPNVGEEA LRNLDEAGIV YIGAEVQPGD
ILVGKITPKG ESPMTPEEKL LRAIFGEKAS DVRDTSLRLP PGAYGTIVEV RVFNRHGVDK
DERALQIERE EVERLARDRD DELAILERNI YSRLKTLIMG KVAVKGPKGI KAGSEINDEL
LSTLSRGQWW QLALGEEADA KEVEALHEQF EAQKRALDHR FEDKVEKVRR GDDLPPGVMK
MVKVFVAVKR KLQPGDKMAG RHGNKGVISK VVPIEDMPFL ADGTHVDLVL NPLGVPSRMN
VGQILETHMG WAARGLGIQI DEALQDYRRS GDLTPVKEAM RLAYGDETYE GAFADRDDED
LVEMASRVTK GVPIATPVFD GAKEPDVNDA LRRAGFDQSG QSIVFDGRTG EQFARPVTVG
VKYMLKLHHL VDDKLHARST GPYSLVTQQP LGGKAQFGGQ RLGEMEVWAL EAYGAAYTLQ
EMLTVKSDDV AGRTKMYESI VKGEDNFEAG VPESFNVLVK EVRGLGLNME LLDADEE
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