Gene Rsph17025_2540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2540 
Symbol 
ID5083993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2578045 
End bp2578971 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content69% 
IMG OID640484102 
Producthypothetical protein 
Protein accessionYP_001168733 
Protein GI146278574 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAACTCT CGGAAAATCT GCGTGGCGCC TTGGCCATGT CGGTCGCCAT GGCCGCCTTC 
ACCGTCAATG ACGCGCTGAT GAAGGCCGTC ACCCAGACCA TGCCGCTCTT TCAGGCCATC
GCCCTGCGAG GGCTGGTGAC CCTGCCGATG CTGCTGGCCT GCGGATGGGC CTCGGGCGGG
CTGCGCTGGC GCATCCCCCG GCCCGACAGA TTTCTGCTTG CCCTTCGGGC GGGCGCGGAT
GTGCTGGCAA CGGTCATGTA CCTCACGGCC CTGATGATGC TGCCGCTCGC GAACCTGGTC
GCAATCCTCC AGTCGGTTCC GTTGGCGGTC ACGCTTGCGG CGGCCCTGTG GCTGAAGGAG
CCCCTGGGCT GGCGGCGGCT CACCGCGATC CTGATCGGCT TCGGGGGCGT GCTCCTCATC
GTGCGTCCGG GTGCCGAGGG CTTCAACCTG TGGTCGCTCC TCGGTCTGGC CTCGGTCGGC
TGCGTCGTGG CGCGCGATCT GTCAACCCGC AGGCTCGGGG GGAGGCTTCC GGCCACCACC
GTCGCCTTCT GGACGTCGGC GGCCGTGACC GCCATGGGGC TCGTGGGCTT GACCCGGTCC
GGGGTTGCCC CGGTCGCGAT GGCCGAGATG ATGCAGATCC TGGGCGCCGC GGTCGCGCTG
ATCGTGGGCT ATCTCGCGAT CGTTCTCGCC ATGAGGGGAG GGGACATTGG CGTGGTCTCT
CCCTTCCGCT ATACGGCGCT GGTCTGGGCG ATCGGCCTCG GCTGGCTGCT CTTTGGAAAC
CTGCCGGACG GGCTCACGCT GGCCGGCTCG GCGATCGTGA CCGCCACCGG GATCTTCACG
CTCTGGCGCG AGTCGCGGCT TCGCCGGCGC TTGCGGGAAG CATCTGTTGA CATCACTCGC
GACTCCCCCT ATACGCCGCC TACCTGA
 
Protein sequence
MQLSENLRGA LAMSVAMAAF TVNDALMKAV TQTMPLFQAI ALRGLVTLPM LLACGWASGG 
LRWRIPRPDR FLLALRAGAD VLATVMYLTA LMMLPLANLV AILQSVPLAV TLAAALWLKE
PLGWRRLTAI LIGFGGVLLI VRPGAEGFNL WSLLGLASVG CVVARDLSTR RLGGRLPATT
VAFWTSAAVT AMGLVGLTRS GVAPVAMAEM MQILGAAVAL IVGYLAIVLA MRGGDIGVVS
PFRYTALVWA IGLGWLLFGN LPDGLTLAGS AIVTATGIFT LWRESRLRRR LREASVDITR
DSPYTPPT